| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1862 |
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| Symbol | |
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| ID | 6409521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1998764 |
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| End bp | 2000113 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711750 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001990863 |
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| Protein GI | 192290258 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTG CCCTCGACAA ATACGCCAAG AGCTCGGTGC CGCGCTACAC CAGCTATCCC
ACCGCACCGC ATTTCGCGAA GGACTTCCCG GAGTCGATCT ATCGCGGCTG GCTCGCCCAG
CTCGACACCG ACGAGCCGGT TTCGCTGTAT CTTCATGTGC CGTTCTGCAA GCAGATGTGC
TGGTACTGCG GCTGCAACAT GAAGCTGGCG GCGAAGTACG ATCCGGTCGC CGACTACGTC
GAGCACCTGA TCGACGAAAT CGATCTGGTC GCGGACGCTC TCCCCGGCAC CATGCCGGTG
CGTCATCTGC ATTTCGGCGG CGGCACCCCG ACGGTGATCG ATCCGCAGGA TCTCGGCGCG
CTGATGACGC TGCTGCGCGA GCGCTTCGAG TTCCTGCCCG ATGCCGAGAT CGCGATCGAG
AGCGACCCGC GCACGCTGAC CGAAGACATG GCCGCCAAGA TCGGCGAGCT CGGCTTCACC
CGCGCCAGCT TCGGCGTGCA GGAATTCGAC CCGAAGGTGC AGGAAGCGAT CAACCGCGTC
CAGCCGCCCG AAATGGTCGC GCGCGCGATG CAGCTGTTCA AATCGGCCGG CGTCGAGCGC
ATCAATTTCG ACCTGATCTA CGGCCTGCCC TATCAGACCG CCGAAGACCT GCGCCGCACC
GTCGAACAGT GCGTCGAGAT GAAGCCCGAC CGGGTCGCGC TATTCGGCTA CGCTCACGTG
CCGTGGGTCG CCAAGAACCA GCGGATGATC CCGGACGAGT CGCTGCCGAA GCCGGAGCTG
CGCGCCACGC AGGCCGAGAC CGCTGCCGAA GCCCTGGTGA AGGGCGGCTA CGTCCGCATC
GGCATCGACC ATTTCGCGCT GCCGGGTGAC TCGCTCGCGA TCGCGGCCAA GACCGGCGAA
CTGCACCGGA ATTTCCAGGG CTACACCTCC GACGCGGCGC AGACCCTGAT CGGCCTGGGC
GCCACATCGA TCGGCCGCAC CCCGAGCGGC TATGTGCAGA ACATCAGCGA AACCGGTGCC
TGGTCGCGCG CGGTCGAAGC CGGCAAGATC CCGGTCGCGC GTGGTCACGC TCTGACCCAG
CAGGACAATC TGCGCGCCCA CGTGATCGAA CGCATCATGT GCGACGGCAA GGTCGACCTC
GCCGCAGCCG GCAAGGCCTT CGGCTGTGGC GAAGACTGGT ACGCGCCGGA GCAGGACTCG
CTCGCCGAAC TGCAGCGCGA CGGCGCCGTG GTGTGCAATG GCAGCAAGCT GACGCTGACG
CCGGAAGGCG TCCGGCTGTC GCGTGTGGTG GCGTCGGTGT TCGACACCTA CCTGCGCAAC
TCGTCGGTCC GGCACTCGAT CGCGGTCTGA
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| Protein sequence | MSSALDKYAK SSVPRYTSYP TAPHFAKDFP ESIYRGWLAQ LDTDEPVSLY LHVPFCKQMC
WYCGCNMKLA AKYDPVADYV EHLIDEIDLV ADALPGTMPV RHLHFGGGTP TVIDPQDLGA
LMTLLRERFE FLPDAEIAIE SDPRTLTEDM AAKIGELGFT RASFGVQEFD PKVQEAINRV
QPPEMVARAM QLFKSAGVER INFDLIYGLP YQTAEDLRRT VEQCVEMKPD RVALFGYAHV
PWVAKNQRMI PDESLPKPEL RATQAETAAE ALVKGGYVRI GIDHFALPGD SLAIAAKTGE
LHRNFQGYTS DAAQTLIGLG ATSIGRTPSG YVQNISETGA WSRAVEAGKI PVARGHALTQ
QDNLRAHVIE RIMCDGKVDL AAAGKAFGCG EDWYAPEQDS LAELQRDGAV VCNGSKLTLT
PEGVRLSRVV ASVFDTYLRN SSVRHSIAV
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