| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1842 |
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| Symbol | |
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| ID | 6409501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1978361 |
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| End bp | 1979578 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642711730 |
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| Product | hypothetical protein |
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| Protein accession | YP_001990843 |
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| Protein GI | 192290238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.839069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTCT TCGGACTTGC GGCCGTTGTC GCGGCGACAT CGTTGTTCGC ACCCGGCGTT
GCGCTTGCGC AGAAATCCTA CGGCCCGGGA GCCAGTGACA CCGAGATCAA AGTCGGCAAT
TTCGTGCCTT ATAGCGGCCC GGCGTCGGCT TACGGCATCG TCGGCCAGGT CCAGAGCGCC
TACGTCAAGA TGCTGAACGA GAAAGGCGGC ATCAACGGCC GCAAGATCAA TTTCATTTCG
TATGACGATG CCTACTCGCC GCCGAAGGCG GTGGAGCAGA CCCGCAAGCT GGTCGAAGGC
GACGAGGTGC TGTTCCTGTA CCACACGCTC GGTACGCCAT CGAACACCGC CGTCATGAAA
TATCTGAACC AGAAGAAGGT GCCGCAGCTG ATGCTGTCGA GCGGCGGCAC GCGGTTCGGC
GATGATCCGA AGACCTATCC GTGGACCATG CCGTTCAATC CGCCCTATCA GGCGGAGGGT
CGGATCTACG CGAAGTGGAT CATGGCAACC TATCCCAACG CAAAGATCGC CGTGCTGGTG
GCGAACGACG ACTACGGCAA GGACATCTAC AAGGGCGTCA AGGACGGCTT CGGCGCCAAG
ACCTCGATGA TCATTTCGGA GGCGACCTAC GACATCACCG ATCCGACCAT CGATTCGCAG
ATGGCCAAGC TCAAGGCTTC GGGCGCCGAT CTGTTCCTCA ATCTCTCCAC GCCGAAATTC
GCCGCGCTGG CGATCCGCAA GATGGGCGAA CTCGGCTGGA AGCCGGTTCA TGTTCTCAAC
AACGTCTCGT CGTCGGTCGG TGCAGTGATC AAACCAGCCG GGATGGAATA TGCCCAGGAC
GCGATCACCG CGAACTACGT CAAGGACCCG ACCGATCCGA CCTGGAAGAA CGATCCGGGC
GTGAAGGAGT GGGACGCCTT CCTCGAGAAA TACATGCCGG GCGCCGATCG CTCCAACGGT
CTGCTGCTGT ATTCCTATGG CGCGGGGCAG ACGCTGGAAT ACATCCTGAG GCAGGCTGGC
GATAATCTGA CCCGCGAGAA CATCATGAAG GTGGCGACCA GCCTGAAGGG CTACGCACCG
GCCTCGCTGC TGCCAGGCAT CACCATGAAC ACATCACCCA CCGATCATTT TCCGATCGAG
CAGATGCAGC TGATGCGGTT CAAGGGCGAC CGCTGGGAGA TGTTCGGCGA CGTGCTCGAG
GCACGGGTCA CCAACTAA
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| Protein sequence | MRLFGLAAVV AATSLFAPGV ALAQKSYGPG ASDTEIKVGN FVPYSGPASA YGIVGQVQSA
YVKMLNEKGG INGRKINFIS YDDAYSPPKA VEQTRKLVEG DEVLFLYHTL GTPSNTAVMK
YLNQKKVPQL MLSSGGTRFG DDPKTYPWTM PFNPPYQAEG RIYAKWIMAT YPNAKIAVLV
ANDDYGKDIY KGVKDGFGAK TSMIISEATY DITDPTIDSQ MAKLKASGAD LFLNLSTPKF
AALAIRKMGE LGWKPVHVLN NVSSSVGAVI KPAGMEYAQD AITANYVKDP TDPTWKNDPG
VKEWDAFLEK YMPGADRSNG LLLYSYGAGQ TLEYILRQAG DNLTRENIMK VATSLKGYAP
ASLLPGITMN TSPTDHFPIE QMQLMRFKGD RWEMFGDVLE ARVTN
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