Gene Rpal_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1823 
SymbolfliI 
ID6409481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1958066 
End bp1959391 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content65% 
IMG OID642711710 
Productflagellum-specific ATP synthase 
Protein accessionYP_001990824 
Protein GI192290219 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03498] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00582391 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCCC TGGCGGAACA GATCGGCGAC ATCGACAGCG TCAATACGTA TGGCCGTGTC 
GTCGGCGTCC GCGGACTGAT GGTCGAAATC GCCGGGCCGA TTCACGCGAT GAGCGTTGGC
GCACGCATCG TTGTCGAGAC CGGCGCCAAT CGTGAGATCC CTTGCGAAGT AATCGGCTTC
ACCGGCAACA ACGCCATCGT CATGCCGTTT GCCGGGCTCG AAGGCGTGCG CCGCGGCTGC
CGTGCGATCA TCGCCAACTC TGCTGCCCAG GTGCGACCGT CGCCGCACTG GCTCGGCCGC
GTCGTTAACG CTTTGGGCGA ACCGATCGAC GGCAAGGGGC CTCTGGTACA AGGCCCGTCG
CCGATGCAGT TCCGCAATCA GCCGCCGCCG GCGCATTCGC GCAAGCGCGT CGGCATGCCG
CTCGATCTCG GCGTACGTGC ACTGAATACG TTTCTCACCT GCTGTCGCGG GCAGCGCATG
GGTATCTTCG CCGGTTCCGG CGTTGGTAAG TCGGTGCTGC TGTCGATGCT CGCCCGCAAC
GTCGATGCCG CGGTATCGGT GATCGGGCTG ATCGGCGAAC GCGGCCGTGA GGTGCAGGAG
TTCCTGCAGG ACGACCTCGG TGAGGAAGGC CTCGCGCGCT CGGTTGTGGT GGTCGCGACG
TCGGACGAGC CGGCGCTGAT GCGGCGGCAG GCGGCGTATC TGACGCTGGC GATCGCCGAA
TACTTCCGCG ACAACGACAA GGACGTGCTG TGCCTGATGG ACTCGGTCAC GCGCTTTGCG
ATGGCGCAGC GTGAGATCGG ACTGTCGGCC GGCGAGCCGC CGACCGCCAA GGGCTACACG
CCGACGGTGT TCACCGAACT GCCGAAACTG CTCGAACGTG CCGGTCCGGG GCTGGGCGAG
GGCACCATCA CCGGCATCTT CACCGTGCTG GTCGACGGTG ACGATCACAA CGAGCCGGTC
GCCGACGCGG TGCGCGGCAT TCTCGATGGC CATATTGTGA TGCAGCGCTC GATCGCCGAG
CGCGGCCGCT ATCCGGCCAT CAATGTGCTG AAGTCGGTGT CGCGAACGAT GCCGAAATCA
GCCGATCCCG TTTATCTGCC GATGATCAAG CGGGCGCGGC AGATCATGGC GACCTACGCC
GACATGGAAG AGCTGATCCG GCTCGGCGCC TATCGTCCCG GCTCCAGCGC CGAAGTCGAC
GAAGCGGTGC GGCTGCACGA GCCGCTCGAG GATTTCCTCC GCCAAGGCAA GGACGAGGCG
ACCAGCTTGC AGTCGGGATA TGTCCAATTG GAGCAGATCC TGAGTAATTC GGAAACGGAA
CGCTAA
 
Protein sequence
MKALAEQIGD IDSVNTYGRV VGVRGLMVEI AGPIHAMSVG ARIVVETGAN REIPCEVIGF 
TGNNAIVMPF AGLEGVRRGC RAIIANSAAQ VRPSPHWLGR VVNALGEPID GKGPLVQGPS
PMQFRNQPPP AHSRKRVGMP LDLGVRALNT FLTCCRGQRM GIFAGSGVGK SVLLSMLARN
VDAAVSVIGL IGERGREVQE FLQDDLGEEG LARSVVVVAT SDEPALMRRQ AAYLTLAIAE
YFRDNDKDVL CLMDSVTRFA MAQREIGLSA GEPPTAKGYT PTVFTELPKL LERAGPGLGE
GTITGIFTVL VDGDDHNEPV ADAVRGILDG HIVMQRSIAE RGRYPAINVL KSVSRTMPKS
ADPVYLPMIK RARQIMATYA DMEELIRLGA YRPGSSAEVD EAVRLHEPLE DFLRQGKDEA
TSLQSGYVQL EQILSNSETE R