| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1783 |
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| Symbol | |
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| ID | 6409440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1917033 |
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| End bp | 1917983 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642711671 |
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| Product | TIR protein |
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| Protein accession | YP_001990786 |
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| Protein GI | 192290181 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAG TCTTTTTTTC CTATTCGCAC GCCGATGAAG CATTGCGCGA TCAGATCGAG
ACGCAACTTG CGCTTCTCAA GCGCCAAGGA ATCATCGACG TTTGGCATGA TCGACGTATT
GGTGCGGGAC GCGAGTTCGC GCGAGAGATT GATCAGCACG TCGAAAGCGA CGAGATCATC
CTCCTTCTTG TCAGCGCTGA TTTTCTTGCG TCCGACTATT GCTATGAAAA GGAAATGCTA
CGCGCATTGA CACGGCATGA TGCTGGCGAA GCCGTCGTGA TTCCCGTTAT TCTCCGCGCC
TGCGATTGGC ACGGTGCGCC CTTCGGAAAA TTAAACGCTG TTCCCCGTGA TGGAAAGCCC
ATCACGCAAT TCGCCGATCG TGACGCCGCA ATGCTTGAAG TGGCAAGGGC GGTCCGCTCC
GTGGCTGAGC GTTTTGGCTC TGTCGCTTCG CCAAAAAAAA CTGCGCAAGA TGTCGCACGT
TCGAGCTTGC AGGGTGCGCT TTCGCCGCGA AGCAGCAATC TGCGGCTGGC CAAAACGTTC
AACGACAAAG ACAAAGACGA GTTTCGCACG GAAGGCTTCG AGTATCTCTC GCGCTTCTTT
GAGAACTCCA TAGCAGAGCT TTCCAAACGC AATCCTGGCA TTGAAGCGAC CTTTCGGAAA
ATCGACGCAA ACCGCTTCGT CGCGAAGGCT TACAGGAACG GGCGATCAGC GACCTCTTGC
ACTGTCTTCA TGGGGGGGAT GATGGGCAAT GGCATCTCTT ATCTCGCCAG AGAGACGACT
GAGAGCAATT CGCACAATGA AATGTTGACG GTGGAGGCCG ACGACCAAGC GCTTTACTTT
CAGTCGTTCG GCATGGCGGT GGGTCGTGGT AACAGACAGA AATTAAGCTA TGAAGGGGCG
GCCGAGCTTT ACTGGACCAT GTTCATTGAG CCCCTTCAGC AAGGGAAATA A
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| Protein sequence | MPKVFFSYSH ADEALRDQIE TQLALLKRQG IIDVWHDRRI GAGREFAREI DQHVESDEII
LLLVSADFLA SDYCYEKEML RALTRHDAGE AVVIPVILRA CDWHGAPFGK LNAVPRDGKP
ITQFADRDAA MLEVARAVRS VAERFGSVAS PKKTAQDVAR SSLQGALSPR SSNLRLAKTF
NDKDKDEFRT EGFEYLSRFF ENSIAELSKR NPGIEATFRK IDANRFVAKA YRNGRSATSC
TVFMGGMMGN GISYLARETT ESNSHNEMLT VEADDQALYF QSFGMAVGRG NRQKLSYEGA
AELYWTMFIE PLQQGK
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