| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1768 |
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| Symbol | |
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| ID | 6409425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1899728 |
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| End bp | 1902736 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711656 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001990771 |
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| Protein GI | 192290166 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCAG ACCCGCCGCT TGCCGAATTC ACCGCGGCTT ACGCGCCGGA CGATGCTGCG
CTGGCTGCGG AGCTGCTGAC GACCGCCACG CTGACGCCCG ACCGTGAAGC CCAGATCGAC
GCCATCGCGA CCGACCTGAT CACCGCGATC CGCGGTTCCG AACACGGCCT GAGGGGCGTC
GAAGCCATGC TGCGCGAATT CGCGCTGTCG ACCAAAGAAG GCCTGGCCCT GATGGTGCTG
GCCGAGGCGC TGCTGCGGGT ACCGGATGCT GCGACTGCGG ACGCCTTCAT CGAGGACAAG
CTCGGCCAGG GCGACTTCGC GCATCACCGT ATCAAGTCCG ATGCCGTGCT GGTGAACGCC
TCTGCCTGGG CCCTCGGACT ATCGGCACGC CTCGTCCATG CCGGCGAGAC GCCGCAAGGC
ACGCTTGCGG CCTTAACGCG GCGGATCGGC GCGCCCGCGG TGCGCGCCGC GACACGTCAG
GCGATGCGGC TGATCGGCAA TCACTTCGTG CTCGGCGAAA CGATCGACGC GGCGCTCGCC
CGCGCACAGC CGTATGCGCG TGAGGGCTCT CGCTATTCTT ACGACATGCT CGGCGAAGGC
GCCCGCACTG CCGCGGATGC CGAACGTTAT TACCAATCCT ACGCCGATGC GATCATCGCG
ATCGGCCGCC GCGCCGGCAA CGCGGCGCTG CCGGCGAGGC CTGGCATCTC GGTGAAGCTG
TCGGCGCTGC ATCCACGGTT CGAGGCGATC AGCCGCGACC GCGTGATGCG GGAACTGACG
CCGCGGCTGC TCAAACTGGC GCAGCTCGCC AAGAGCCACG ACCTCGCCTT CACGGTCGAT
GCCGAAGAAG CCGACCGGCT CGAGCTGTCG CTCGAGGTGT TCGCCGCCTG CTTTGCCGAT
CCATCGCTCA AAGGCTGGGA CGGTTACGGT CTCGCGGTGC AGGCGTATCA GAAGCGTGCC
GCCACGGTGA TCGACCACGT CGCCGAGCTC GCCCGCGCGT TCGACCGCCG CATGATGCTG
CGGCTGGTGA AGGGCGCCTA TTGGGACACC GAGATCAAGC GCACTCAGGA GCGCGGGCTT
GCCGACTATC CGGTGTTCAC CAGGAAGCCG ATGACCGATC TCAACTACCT GCACTGCGCC
CGCAAGCTGC TGGCGCTGCG CCCGCACCTG TTCCCGCAAT TCGCCAGTCA CAATGCGCTG
ACGGTCGCCA CCATCCTGGC CGAGGCTGGT GATTGCGACG GCTACGAATT CCAGCGGCTG
CACGGCATGG GCGAGGCACT GTATGCCCGG CTGCTCGCCG ACCACCCGCA GGCGATGTGC
CGGATCTACG CGCCGGTCGG CGGGCATAGC GACCTGCTGG CATATCTGGT GCGGCGCCTC
TTGGAGAACG GCGCCAATTC ATCGTTCGTG GCCCAAGCCG GCGACGACAG CGTGCCGATC
GCCGAACTAC TGACGCGACC TGCAACACTG ATCGGCCATC CCGAGAACGC GCGCAACTCG
GCCATCCCAT TGCCGCGTGA TCTGTACCAG CCGCAGCGGA TCAATTCGCG TGGCATCGAA
TTCGGCGACC GCAGCGCGCT CGCGGCACTG CTCGGCGACA TCGAAAGCGC ACGCCGGCCG
CTGCCGACGG TCGCGTCCAC CACGCCGGAA CAAGCCGCTG CCACGGTCAC TGCCGCACGC
AAAGGCTTCG AGTCCTGGAG CCGGACGTCC GCCGATCATC GCGCCGCGAT CCTGCAGCGC
GCCGGCGATC TGCTGGAGCA ACGCCGTGGC GAGCTGATCG CGCTCCTGCA GGACGAAGGC
GGCAAGACGC TCGATGATGG CGTGGCGGAA GTGCGCGAAG CAGTCGACTA CTGCCGCTAC
TACGCCAGCG AGGGTCGCCG GCTGTTCGGC GGGCCGCTGG TCCTCCCTGG CCCGACCGGC
GAGCGCAACA CGCTGACCTT GCGTGGCCGC GGCGTGTTCG TCGCGATCAG CCCCTGGAAC
TTTCCGTTGG CGATCTTCCT CGGCCAGATC ACGGCGGCGC TGATGGCCGG CAACGCGGTG
GTCGCAAAGC CGGCCGAGCA GACGCCGGTG ATTGCCGAGG TCGCGGTGCG CCTGTTGCAC
GCAGCCGGCG TGCCGCCGGC TGCGCTGCAT CTGGTGCAAG GCGACGGCCG CATCGGCGCG
GCACTGATCG AGCAGCGCGA CATCGCCGGC GTCGTATTCA CGGGATCGAC CGAGGTCGCG
CGTGCGATCA ACCGGACACT GGCCGCCAAG GACGGTCCGA TCGTGCCGCT GATCGCCGAG
ACCGGCGGCA TCAACGCGAT GATCGTCGAT GCCACCGCGC TGCCCGAGCA GGTCGCCGAC
GACGTCATTG CCTCTGCATT CCGCTCCGCT GGTCAGCGCT GTTCGGCGCT GCGGCTCCTG
TGCGTGCAGG ACGACGTTGC CGACCGAGTG ATCGCGATGA TCGCCGGCGC GGCGCGCGAG
CTAACAATAG GCGATCCGCG CGATCCGGCG ACGCATGTCG GACCGGTGAT CGACGCCGAG
GCGAAGACCA GGCTCGAAAC GCATATCGCC GCGATGAAGC GCGAGGCGCA GCTTCACTTC
GCCGGCACCG CGCCCGCGAG CGGCAACTTT GTGGCGCCGC ACATCTTTGA ACTCAGCCGC
GCCTCAGAGC TCACCGAGGA AGTGTTCGGC CCCATCCTGC ACGTGGTGCG CTACAAGGCG
GCGCAGTTCG ACGATCTCCT CAATGACATC GCCACGACCG GCTATGCGCT CACGCTCGGC
GTGCAGTCGC GGATCGACGA CACGATCGCG CGTGTGATCG CGCGGCTTCC CACCGGCAAT
GTCTATGTGA ATCGCAACAT CATCGGCGCC GTGGTCGGCG TCCAGCCGTT CGGTGGCTCC
GGCCTGTCGG GCACCGGCCC CAAAGCCGGC GGCCCGCATT ATCTGCCGCG GTTCGCACTG
GAACAGACGG TGTCGATCAA CACTGCCGCC GCCGGCGGCA ATGCCGCTCT GCTGACAGGC
AGCGAATAA
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| Protein sequence | MPSDPPLAEF TAAYAPDDAA LAAELLTTAT LTPDREAQID AIATDLITAI RGSEHGLRGV
EAMLREFALS TKEGLALMVL AEALLRVPDA ATADAFIEDK LGQGDFAHHR IKSDAVLVNA
SAWALGLSAR LVHAGETPQG TLAALTRRIG APAVRAATRQ AMRLIGNHFV LGETIDAALA
RAQPYAREGS RYSYDMLGEG ARTAADAERY YQSYADAIIA IGRRAGNAAL PARPGISVKL
SALHPRFEAI SRDRVMRELT PRLLKLAQLA KSHDLAFTVD AEEADRLELS LEVFAACFAD
PSLKGWDGYG LAVQAYQKRA ATVIDHVAEL ARAFDRRMML RLVKGAYWDT EIKRTQERGL
ADYPVFTRKP MTDLNYLHCA RKLLALRPHL FPQFASHNAL TVATILAEAG DCDGYEFQRL
HGMGEALYAR LLADHPQAMC RIYAPVGGHS DLLAYLVRRL LENGANSSFV AQAGDDSVPI
AELLTRPATL IGHPENARNS AIPLPRDLYQ PQRINSRGIE FGDRSALAAL LGDIESARRP
LPTVASTTPE QAAATVTAAR KGFESWSRTS ADHRAAILQR AGDLLEQRRG ELIALLQDEG
GKTLDDGVAE VREAVDYCRY YASEGRRLFG GPLVLPGPTG ERNTLTLRGR GVFVAISPWN
FPLAIFLGQI TAALMAGNAV VAKPAEQTPV IAEVAVRLLH AAGVPPAALH LVQGDGRIGA
ALIEQRDIAG VVFTGSTEVA RAINRTLAAK DGPIVPLIAE TGGINAMIVD ATALPEQVAD
DVIASAFRSA GQRCSALRLL CVQDDVADRV IAMIAGAARE LTIGDPRDPA THVGPVIDAE
AKTRLETHIA AMKREAQLHF AGTAPASGNF VAPHIFELSR ASELTEEVFG PILHVVRYKA
AQFDDLLNDI ATTGYALTLG VQSRIDDTIA RVIARLPTGN VYVNRNIIGA VVGVQPFGGS
GLSGTGPKAG GPHYLPRFAL EQTVSINTAA AGGNAALLTG SE
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