| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1759 |
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| Symbol | |
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| ID | 6409416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1889626 |
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| End bp | 1890501 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711647 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_001990762 |
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| Protein GI | 192290157 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0300118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGATT TTCACGGCGT ATTCCCTTAT CTGGTGTCTC CGGTCGATGC GGAGGGCCGC
GTTCGCGCCG ATGTGATGGG ACGGCTGTGC GACGATCTGA TCCAGGCCGG CGTGCACGGG
CTGACGCCGC TCGGCTCGAC CGGGGAATTT GCCTATCTCG GCACCGCGCA GCGCGAGGCC
GTGGTGCGGG CGACGATCGA AGCCGCGCAG CGCCGGGTGC CGGTGGTGGC CGGCGTCGCC
TCGACCTCGG TGGCGGACGC GGTGGCGCAG GCCAAGCTGT ACGAGAAGCT CGGCGCCGAC
GGCATTCTGG CGATTCTCGA AGCTTATTTT CCGCTGAAGG ATGCGCAGAT CGAAAGCTAT
TTCCGCGCCA TTGCGGATGC AGTCGAGATC CCGGTGGTGA TCTACACCAA CCCGCAATTC
CAGCGCTCGG ATCTGACGCT CGACTTGATC GCGCGGCTCG CGGAGCATCC GCGGATTCGC
TACATCAAGG ATGCCTCGAC CAATACCGGG CGGCTGTTGT CGATCATCAA CCGCTGCGGC
GACGCGCTGC AGGTGTTCTC GGCCTCGGCG CACATCCCCG CTGCGGTGAT GCTGATCGGC
GGCGTCGGCT GGATGGCGGG CCCCGCCTGC ATCGCGCCGC GCCAGAGCGT CGCGCTGTAC
GAGCTGTGCA AGGCGCAGCG CTGGGACGAA GCCTTGATGC TGCAGCGCAA GCTGTGGCGC
GTCAACGAAG CCTTCGCCAA ATTCAACCTC GCCGCCTGCA TCAAGGCCGG CCTGTCGCTG
CAAGGCTACG ACGTCGGCGA TCCCATCCCG CCGCAAGCCG CGCTGACGGC CGAGGAGCGG
AAAGCGGTCG AGAAGGTGCT GGCGGAGATC GCGTAA
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| Protein sequence | MTDFHGVFPY LVSPVDAEGR VRADVMGRLC DDLIQAGVHG LTPLGSTGEF AYLGTAQREA
VVRATIEAAQ RRVPVVAGVA STSVADAVAQ AKLYEKLGAD GILAILEAYF PLKDAQIESY
FRAIADAVEI PVVIYTNPQF QRSDLTLDLI ARLAEHPRIR YIKDASTNTG RLLSIINRCG
DALQVFSASA HIPAAVMLIG GVGWMAGPAC IAPRQSVALY ELCKAQRWDE ALMLQRKLWR
VNEAFAKFNL AACIKAGLSL QGYDVGDPIP PQAALTAEER KAVEKVLAEI A
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