Gene Rpal_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1733 
SymbolchlL 
ID6409390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1860125 
End bp1861063 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content61% 
IMG OID642711621 
Productprotochlorophyllide reductase iron-sulfur ATP-binding protein 
Protein accessionYP_001990736 
Protein GI192290131 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01281] light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCC TGACTGATCC CAATAAGCTC AAGACCTCGG GCTGCGCCGA CGTCAACGCG 
TCGAAATGCG CCGAGGGCGA CGGCGAGGGC AGTGTCCAGG TCCAGCTCGA CCCCAACCTC
AACATCGGCA CCGCCAAGGT GTTCTCGATC TACGGCAAGG GCGGCATCGG CAAGAGCACG
ACCTCGTCGA ACCTGTCGGT GGCGTTCTCC AAGCTGGGCA AGCGCGTGCT GCAGATCGGC
TGCGATCCGA AGCACGACTC CACCTTCACG CTCACCAAGA AGCTGATGCC GACGGTGATC
GACGTCTTGG AGTCGGTGAA CTTCCACTCC GAGGAGGTAC GCCCCGAAGA CTTCGTGTTC
GAGGGCTACA ACGGCGTGAT GTGCGTCGAG GCGGGCGGCC CGCCGGCCGG CACCGGCTGC
GGCGGCTACG TCGTCGGCCA GACCGTCAAG CTTCTCAAGG AGCATCACCT GCTCGAAGAT
ACCGACGTGG TGATCTTCGA CGTGCTCGGT GACGTGGTGT GCGGCGGCTT CGCTTCGCCG
CTGCAGCATT CGGAGCGGGC GATGATCGTC GCCGCCAACG ATTTCGATTC GATCTTCGCC
GCCAACCGCA TCGCCGCGGC GATCCAGGCG AAGTCGAAGA ATTATGCCGT CCGTCTGGCG
GGAGTGATTG CCAATCGCAG TCGCGAGACC GACCAGATCG ACAAGTTCGG CGAGCGCACC
GGCATCAAGC GCGTCGCGCA TCTGCCGGAT CTGGATGTCA TCCGAAAGAG CCGTCTGAAA
AAGATGACGC TTTTTGAGAT GGATCACACC CCAGAAATTG AAGCTGTGCA AAATGAGTAT
CTTCGGCTCG CGACGGAATT GTGGGAGGCG AAGGAACCCC CGGTCCAGGG CAAGCCGCTG
AAGGATCGCG ACATCTTTGA TCTCTTGGGA TTTGATTGA
 
Protein sequence
MNILTDPNKL KTSGCADVNA SKCAEGDGEG SVQVQLDPNL NIGTAKVFSI YGKGGIGKST 
TSSNLSVAFS KLGKRVLQIG CDPKHDSTFT LTKKLMPTVI DVLESVNFHS EEVRPEDFVF
EGYNGVMCVE AGGPPAGTGC GGYVVGQTVK LLKEHHLLED TDVVIFDVLG DVVCGGFASP
LQHSERAMIV AANDFDSIFA ANRIAAAIQA KSKNYAVRLA GVIANRSRET DQIDKFGERT
GIKRVAHLPD LDVIRKSRLK KMTLFEMDHT PEIEAVQNEY LRLATELWEA KEPPVQGKPL
KDRDIFDLLG FD