Gene Rpal_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1727 
Symbol 
ID6409384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1851075 
End bp1851737 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID642711615 
ProductHeme oxygenase 
Protein accessionYP_001990730 
Protein GI192290125 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5398] Heme oxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGTGG AAGCAGCGAA ACGCGACGCC GAGAGCGTCG TCACCGCGTT GTATGTGCGG 
ACCCGACAGC TGCATCTCGA AGCCGAGAAG TCGGGCATCC TCTCCGAGAT TCTGCACGGC 
ACCGCAGGGC GCGACGGCTA CACGCTGCTG CTGCGCAATC TGCATCCGGC CTATCGGGCG 
ATCGAAGCCG GCATCGAGCG ACACCGCGAC AATCCGATCC TGGCGCCGCT CGCCTCGCAT 
CCGCTGGCAC GCACGCCCGC GATCGAATCC GACCTCGCCG CGCTTGCCGG TGCGGATTGG 
CACGAGCGGC TGCCGGTACT GCCGGCTGCC GAAGCCTATG CACAGCGGAT CGCGGAGGTG 
AGCGAAGGCG ACGGCAGCCG CCTGATCGCG CACGCCTACA CCCGCTATCT CGGCGACCTC 
AACGGCGGAC AAATCGTGCG TCGGCTGCTG GAGAAGACCA TGCAGCTCAG TGCCGGCGAA 
CTCGCCCACT ACGACTTTTC GGCAATCGGT GATCCGGCGA CGTTGAAGAC CGACTATCGC 
GAGGCGCTGG AGCGGGCCGG TGCTGCGGCT CCCGATGCGG CGGCGGTGAT CGAGGAAGGC 
GCGGTGGCGT TCACCTGCAA CATCGCACTG TCGGTCGCGG TGCAGCAGCA TCTCGAAGCC 
TAG
 
Protein sequence
MVVEAAKRDA ESVVTALYVR TRQLHLEAEK SGILSEILHG TAGRDGYTLL LRNLHPAYRA 
IEAGIERHRD NPILAPLASH PLARTPAIES DLAALAGADW HERLPVLPAA EAYAQRIAEV 
SEGDGSRLIA HAYTRYLGDL NGGQIVRRLL EKTMQLSAGE LAHYDFSAIG DPATLKTDYR 
EALERAGAAA PDAAAVIEEG AVAFTCNIAL SVAVQQHLEA