| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1721 |
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| Symbol | |
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| ID | 6409378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1844489 |
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| End bp | 1845694 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711609 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001990724 |
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| Protein GI | 192290119 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.889725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA GCTCCGCAAT TTATGATGTC GTTGTCGTCG GCGGCGGCCC TGCCGGCGCT
ACTGCGGCGT GCGATCTGGC GCGCGCCGGC AAGCGGGTGG TGCTGCTCGA CCGCGCCGGC
CGCATCAAGC CGTGCGGCGG CGCGATCCCG CCGCGCGCGA TCCGCGATTT CGCGATTCCC
GACAGCATGC TGGTCGCCAA GATCAACGCC GCGCGGATGG TGTCGCCGAG CAATGTCGAA
GTCGACATGC CGATCGACGG CGGCTTCGTC GGCATGGTCG ACCGCGAGCA TTTCGACGAG
TGGCTGCGCC AGCGCGCCGC GACCGTCGGC GCCGAACGGC GCACCGGGCT GTTCAAGCGG
TTCAGCCGCG ACGAGTCCGG CGTCAACACC GTGCACTACG AAGGGCGCGG CCCCGACGGG
TCGATGATCG ACCAGACGGT GCGCTGCCGT GCGATCATCG GCGCCGATGG CGCGGTGTCC
GGCGTGGCGC GGCAGTTCCT GAAGGATGCC GACCGCGTGC CGTTCGTGTT CGCCTATCAC
GAGATCATCA AGGCGCCGAC GGCGGAGCAG AAGGCCGCCT ATGAAAGCCG CCGCTGCGAT
GTGTACTACC AGGGCCACGT CTCGCCGGAC TTCTACGGCT GGGTGTTCCC GCACGGCAAT
ACGGTCAGCG TCGGCACCGG CTCGATGCAC AAGGGCTTCT CGCTGCGCGA TTCGGTCGCG
GAGCTGCGCA AGCAGACCGG CCTCGACGAG GTCGAGACCA TCCGCAAGGA AGGCGCGCCG
ATCCCGCTGC ATCCGCTGCC GCGCTGGGAC GACGGCCACA GCGTGCTGCT CGCCGGCGAT
GCCGCCGGCG TGGTCGCGCC GGCGTCGGGC GAGGGCATCT ACTACGCGCT GCTCGGCGGC
CGGCTCGCCG CCGAAGCGGT CGAGGAATTC CTGCAGACCG CCGACGCCAA GGCGCTGAAG
CTGGCCCGCA AGCGCTTCAT GCGCGGCAAC GGTTCGGTGT TCCGGATCCT CGGCCTGATG
CAGTGGTATT GGTACGCCAA CGACAAGCGC CGCGAACAAT TCGTCAGCAT CTGCCGCGAT
CGCGACGTGC AGAAGTTGAC GTGGGACGCC TACATGAACA AAAAGCTGGT CCGGGCGAAA
CCGATCGCCC ACGTCCGGAT CTTCTTCAAG AACCTGGCCC ACATGACGGG GCTGGCTTCG
GTCTGA
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| Protein sequence | MSDSSAIYDV VVVGGGPAGA TAACDLARAG KRVVLLDRAG RIKPCGGAIP PRAIRDFAIP
DSMLVAKINA ARMVSPSNVE VDMPIDGGFV GMVDREHFDE WLRQRAATVG AERRTGLFKR
FSRDESGVNT VHYEGRGPDG SMIDQTVRCR AIIGADGAVS GVARQFLKDA DRVPFVFAYH
EIIKAPTAEQ KAAYESRRCD VYYQGHVSPD FYGWVFPHGN TVSVGTGSMH KGFSLRDSVA
ELRKQTGLDE VETIRKEGAP IPLHPLPRWD DGHSVLLAGD AAGVVAPASG EGIYYALLGG
RLAAEAVEEF LQTADAKALK LARKRFMRGN GSVFRILGLM QWYWYANDKR REQFVSICRD
RDVQKLTWDA YMNKKLVRAK PIAHVRIFFK NLAHMTGLAS V
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