| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1677 |
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| Symbol | |
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| ID | 6409334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1796330 |
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| End bp | 1798642 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711565 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001990680 |
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| Protein GI | 192290075 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTCTG GCCTTGACAA TTCTGCCGAG CTCAGGGTTT CGGACTTCGA CCCGATCACC
CTCGCTGGTG GGACGCGTAC AGAGGTCCTG CCCGGTGCGA TTCAGCCCCA CGCCGCTCTG
TTGGCGCTGG CTCCGGCGGA TTTGACCATC GTCCACGCCG CCGGCGCGAC CGCATCGCTG
CTCGGCGCGG CGGCGGAGTT GTTGCCTGGC ACCGCCGCCT CCACGGCCTT TTCGTCCGAC
CAGATTGCGA GGCTGCAGGC GCTTGCCACT GCCGAGCGCT GGATCGAGCG GCCGCAGCAC
GCCTTCACAC TGAATGCGCC GGACGCCACC CCGATCGACG TCATCGTCCA TCATGCCTCG
GGGCTGCTGG TGGTGGAGCT CGATCCGCGC CGCGAACCCG CGCCGGAAAA TTCGCTGGCG
CTGGTGCAGT CGATGATCCG GCGGGCACGG CCGGCGCCGA ACCTCCAAGG CTTCTGCGAC
GCGATGGCCG CCGAGCTGCG CAGCGTGACC GGCTTCGACC GGGTGATGGT GTACCGCTTT
GCGCGGGACG GCAGCGCCGA CGTGATCGCC GAAGCGCGCG GTCCTGAAAC CAGCCCGTTC
CTCGGCTTGC GCGATCCGCA ACCGGACATC TCAAATCAGC CGGGGTCCAT CAGCCGGATC
CGGGTGCAGC CCGACGTTCA TGCTCCCGCT GCACCGCTGT GGCCGGCGCA CAGTCCGCGC
AACGGCCTCG CGCTTGATCT GTCGTTCAGC GCGACTCGCA GCGCCTCCCC CGAACACAGG
CTGTATCTGG CCCAACTCGG CGTCGCCGCG TCGCTTTCGC TGTCGCTGGT GGTCGAAGGC
GAGTTGTGGG GCCTGATCGT CTGCCATCAT GCCACCCCGC GGTTTCTGCC TTACCGGATG
CGCGAAGCCT GCGCGCTGTT CGCCGAGATG GCATCGCTGC AGCTCGAGAC GCGGCTTGCC
GCCGATCAGC TAGCCGCCCG GCTGCGCAGC ACGCGCATCC ACGAAGAGCT GGTCACGCGG
ATGAGCCAGG AGTCGGATCT CGCCGAAGGG CTGATCCGGT TCTATCCGAA TCTGCTCGAC
TTCATCCCGG CCGCCGGCGT CGGCCTATGG ATCGACGGCC AGTTCACGGG GATCGGTGCG
ACACCGGGAC CTGCACAAGT GGCCGCGATG ATGGGATGGT TGCACGGCGT CCCGCACGAC
GGCGTGTACC ACACCGATTG CCTGGCGCTG GCGTATCCGC CCGCCAAGGC GTTCGCCGGC
TGCGCCAGCG GCCTCCTGGC GCTGTCGCTT TCCAACACGC CGCACAACTA CGTGCTGTGG
TTCCGCCCTG AAGTTGTCCG CGTCGTCACC TGGGCAGGCA TGCCCAACAA GCCGGTCGGC
GTCGATGCTG GCGCGCCCCG AACGCCGAAA GGCTGCGCGT CGAGCTGGCA AGAATCGGTG
CGGCTGCACG GCGAGCCGTG GCTCGACACG GATGTCGATG CAGCGCACCG GCTGCGCGAG
TCGCTGCTCG ACGTCGTGCT GCGGCGGATC GACGGCATCG CCCGCGAGCG ACGGTCGGCG
CAGTTGCTGC AGGAACAGTT GATGCGTCAG GTCGAGCTCG GCCTGAGCCG TTCCAAGGAC
GTCGCCAAGA CGCTGCAGGA AGAGAAGCGG CGGCGGGTGC TGGTCGAGGC CGACCTCTCG
AAGGTGCTGC GTCGGACAGT CGAAGATCAG GAAGCCGAAC GCCTACGGAT CGCCCGCGAA
CTGCACGACA CGCTCGGCCA GTCGCTGACC CTGTTGCAGC TCGGCTTCGA CAAGCTCGGC
CAAGCCGCCG GCGACAATCC CGAATTGCAG CAGCGCATCG CCGAGATGAA GAGCCTGACC
GCCGACGTCG GCCGCCAGGC CAACCGCCTC GCCTGGGAAA TCCGCCCGAC CGCACTCGAC
GACCTAGGCA TCCAGACCGC GATCCAGAAC CTGCTCGACT CCTGGAGCGA GAAGTCGAGC
ATCGAGTTCG ACCTGCACAT GACGCTCGGC TCGCGCCGGC TGCCGTCCCC GGTCGAGACC
ACGCTGTACC GCGTGCTGCA GGAAGCGCTC ACCAACGTGG TGCGCCATGC CTCGGCCCGC
CATGTCAGCG TCATTCTGCA ACTCGGCGAC GACCAGGTGA CGATGATCGT CGAGGATGAC
GGCTGCGGCT TCGTCACCGC CGGCCGTAAG CCGCCGTCTG GGCGGCTGGG CTTGCTCGGC
ATCCGTGAGC GGCTGTCGCT GGTCGGCGGC TCGCTCGAAA TCGAATCCGC GCCCGGCAAG
GGCACTGCGC TGTACGCGCG CATTCCGCTG TGA
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| Protein sequence | MHSGLDNSAE LRVSDFDPIT LAGGTRTEVL PGAIQPHAAL LALAPADLTI VHAAGATASL
LGAAAELLPG TAASTAFSSD QIARLQALAT AERWIERPQH AFTLNAPDAT PIDVIVHHAS
GLLVVELDPR REPAPENSLA LVQSMIRRAR PAPNLQGFCD AMAAELRSVT GFDRVMVYRF
ARDGSADVIA EARGPETSPF LGLRDPQPDI SNQPGSISRI RVQPDVHAPA APLWPAHSPR
NGLALDLSFS ATRSASPEHR LYLAQLGVAA SLSLSLVVEG ELWGLIVCHH ATPRFLPYRM
REACALFAEM ASLQLETRLA ADQLAARLRS TRIHEELVTR MSQESDLAEG LIRFYPNLLD
FIPAAGVGLW IDGQFTGIGA TPGPAQVAAM MGWLHGVPHD GVYHTDCLAL AYPPAKAFAG
CASGLLALSL SNTPHNYVLW FRPEVVRVVT WAGMPNKPVG VDAGAPRTPK GCASSWQESV
RLHGEPWLDT DVDAAHRLRE SLLDVVLRRI DGIARERRSA QLLQEQLMRQ VELGLSRSKD
VAKTLQEEKR RRVLVEADLS KVLRRTVEDQ EAERLRIARE LHDTLGQSLT LLQLGFDKLG
QAAGDNPELQ QRIAEMKSLT ADVGRQANRL AWEIRPTALD DLGIQTAIQN LLDSWSEKSS
IEFDLHMTLG SRRLPSPVET TLYRVLQEAL TNVVRHASAR HVSVILQLGD DQVTMIVEDD
GCGFVTAGRK PPSGRLGLLG IRERLSLVGG SLEIESAPGK GTALYARIPL
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