| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1648 |
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| Symbol | |
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| ID | 6409305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1765529 |
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| End bp | 1767385 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711537 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001990652 |
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| Protein GI | 192290047 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCTT ATCGCTCGAG AACGACGACC CACGGCCGCA ACATGGCTGG CGCGCGCGGC
CTGTGGCGCG CCACCGGTAT GAAGGATTCC GACTTCGGCA AGCCGATCAT CGCGGTGGTC
AACTCGTTCA CCCAGTTCGT GCCCGGCCAC GTCCATCTGA AGGACCTCGG CCAGCTTGTT
GCGCGTGAGA TCGAAGCGGC CGGCGGCGTT GCCAAGGAGT TCAACACCAT CGCGGTCGAT
GACGGCATCG CGATGGGCCA CGACGGCATG CTGTATTCGC TGCCGTCGCG TGAACTGATC
GCCGACAGCG TCGAGTACAT GGTCAATGCC CATTGCGCCG ACGCGATGGT GTGCATCTCC
AACTGCGACA AGATCACGCC CGGCATGCTG ATGGCGGCGA TGCGGCTTAA CATTCCGGCC
GTGTTCGTCT CCGGCGGCCC GATGGAAGCT GGCAAGGTGG TGCTGAAGGG TAAGACACAC
GCGGTCGACC TGATCGACGC GATGGTCGCC GCCGCCGACA GCGCCATGAG CGACGAAGAC
GTGCAGACGA TGGAACGCTC GGCATGTCCG ACCTGCGGCT CGTGCTCGGG CATGTTCACC
GCCAATTCGA TGAACTGCCT CACAGAAGCG CTCGGCCTGT CGTTGCCGGG CAACGGCTCG
GTGCTCGCCA CCCATTCCGA TCGCAAGCGG CTGTTCGTCG AGGCCGGCCA CACCATCGTC
GACCTAGCGC GCCGCTACTA CGAAGGCGAC GATGCCTCGG TGCTGCCGCG CAACATCGCG
AACTTCAAGG CGTTCGAGAA CGCGATGACG CTCGACATCG CGATGGGCGG CTCAACCAAC
ACCGTGCTGC ATCTGCTGGC CGCGGCGCGC GAAGCCGAAC TCGACTTCTC GATGAAGGAT
ATCGATCGGC TGTCGCGCCG GGTGCCGTGC CTCAGCAAGA TCGCTCCGTC GGTGTCCGAC
GTGCACATGG AAGACGTGCA TCGCGCCGGC GGCATCATGG CGATCCTCGG CGAGCTCGAC
CGCGCCGGGC TGCTCGACAC CTCGTGCACC ACGGTGCATT CCGAAACCCT CGGTGCGGCC
TTGGCGCGGT GGGACATCCG CCAGAGCAAC AGCGAGAGCG TCCGCACCTT CTTCCGTGCG
GCGCCGGGCG GCGTGCCGTC GCAGACCGCG TTCAGCCAGG ACCGCCGCTA CGACGAGCTC
GATCTCGACC GTGAGAAGGG TGTGATCCGC GACGCCGCGC ATGCCTTCAG CAAGGACGGC
GGCCTCGCCG TGCTGTACGG CAACATCGCG CTGGACGGCT GCATTGTGAA GACCGCCGGC
GTCGACGCCT CGATCCTGAC CTTCTCGGGT CCGGTGAAGG TGTTCGAGAG CCAGGACGAC
GCGGTGTCGG CGATCCTGAC CAACAAGATC GTCGCCGGCG ATGTGGTCGT GATCCGCTAC
GAAGGTCCGC GCGGTGGTCC GGGCATGCAG GAGATGCTGT ATCCGACCAG CTATCTGAAA
TCGAAGGGCC TCGGCAAAGC CTGCGCGCTG ATCACTGACG GCCGGTTCTC GGGCGGCACC
TCGGGCCTGT CGATCGGCCA CGTCTCGCCG GAAGCGGCGG AAGGCGGCCT GATCGGCCTG
GTACGCGACG GCGACCGGAT CTCGATCGAC ATCCCGAACC GTACCATCAG CCTCGACGTC
TCCGAAGCCG AACTCGCCAA GCGCGGCGAG GAAGAGCGGG CGCGCGGCGA AGCGGCGTGG
ACGCCCAAGG ACCGCAAGCG CAACGTCTCG GCTGCGCTGC AGGCCTACGC GATGCTGACC
ACCAGCGCCG CCAACGGCGC GGTGCGCGAT GTGAAGCGTC GCTTCGGTAA GAACTAA
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| Protein sequence | MPAYRSRTTT HGRNMAGARG LWRATGMKDS DFGKPIIAVV NSFTQFVPGH VHLKDLGQLV
AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPA VFVSGGPMEA GKVVLKGKTH AVDLIDAMVA AADSAMSDED
VQTMERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS VLATHSDRKR LFVEAGHTIV
DLARRYYEGD DASVLPRNIA NFKAFENAMT LDIAMGGSTN TVLHLLAAAR EAELDFSMKD
IDRLSRRVPC LSKIAPSVSD VHMEDVHRAG GIMAILGELD RAGLLDTSCT TVHSETLGAA
LARWDIRQSN SESVRTFFRA APGGVPSQTA FSQDRRYDEL DLDREKGVIR DAAHAFSKDG
GLAVLYGNIA LDGCIVKTAG VDASILTFSG PVKVFESQDD AVSAILTNKI VAGDVVVIRY
EGPRGGPGMQ EMLYPTSYLK SKGLGKACAL ITDGRFSGGT SGLSIGHVSP EAAEGGLIGL
VRDGDRISID IPNRTISLDV SEAELAKRGE EERARGEAAW TPKDRKRNVS AALQAYAMLT
TSAANGAVRD VKRRFGKN
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