| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1595 |
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| Symbol | |
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| ID | 6409252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1706111 |
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| End bp | 1707670 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711484 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001990599 |
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| Protein GI | 192289994 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTGA CGGCGGGCTT GCGCAAGGCG GCGTCGTTCC GCGCCGACGA CATCGCGCTC
GTAACCCCCG AGCGCAGCTT CAGCCATGGC GAGGTACTGG ACCGCGTGGC GCGGCTCGCG
CGCGTGTTCC GCCGCTTCGG CATTGAAGCC GGCGAACGGG TTGCGATCCT CGCGGCCAAC
GGCAATGCGT ACATTGAGTG CTATTTCGCG GTGCTGTGGG CCGGCGGCGT CGTGGTGCCG
ATCAATTCGC GGTTCTCGCT CGCCGAGATG ATCGAGCAGG TGACAGATGC CGAGCCGACG
GTGTTGGTGA GCGATCGCAG CTTTCTCGAC AGTGCGCTGC AACTCGCCGA CGCATGTCGT
GGCATCACAG CGGTGATAGC TGCCGCGCCG GGTGCCGCAG GGCCGCCTAA GCTCCATGAT
TACGAGGCGG TGCTGGCGGA CGAGAAGCCC TGCGCGGATG CGGGGCGCGG CGGCGACGAT
CTCGCTTGCC TGTTCTACAC TGGCGGCACC ACTGGCCGGG CCAAGGGCGT GATGCTCAGC
CACCGCAATC TGTGGGTCAA CGCGGTGGTC ACGTCGCTGT CTTTCGGCTT CGACGAGACG
ACGGTGGCGC TGCACGCTGG GCCGCTGTTC CATCTCGGCG CCGGTGCTCG CGTCTACACC
ACCTCGATCA TGGGCGGGCG CCATGTGGTG ATCCCGCGGT TCTCGCCGAA CGACGTGCTG
GCTGCGATCA GCCAGCACAA GGTGACGGTA GCGACCTTCG TGCCGACGAT GCTCGGCATG
ATCCTGCAGC TGCCGGATCT CGACAGCTAC GATCTGTCGA GCCTGAAGCT GATCACCTAC
GGCGCCTCGC CGATGCCGGA AGCCGTGCTG CAGGCGTGTC TGCGGCGGTT TCCGTCGATC
AGGTTCGGCC AATCCTACGG CATGACGGAG CTGTCGCCGG TCGCAACCAT TCTGTCACCC
GCCGATCATC TGCCGTCCGC GCCGCAGAAT CGGCTGCGCT CGGCCGGTCG GCCCATCGTG
TCGGCGGAAG TGAGGATCGT CGATGCCGAG GACCGCGAGC TGAAACCCGG CGAGGTCGGC
GAGGTTGTGG TGCGCGGGCC GATGGTGATG ATGGGCTATT GGAAGCAGCC GGAACTGACC
GCGCACGTGC TGCGCGGCGG CTGGATGCAC ACCGGCGATT CAGGCCGGTT CGACGCCGAT
GGCTATCTCT ACATCTCCGA CCGCATCAAG GACATGATCA TCACCGGCGG CGAGAACGTG
TATTCGATCG AGGTCGAGCA CGCGATCGCG GCGCATCCTG ACGTGCTGCA ATGCGCGGTG
ATCGGCATCC CGCATGCCAA ATGGGGCGAG GCGGTGCATG CGGTGGTGGT GCGCCGCCCG
GGCTCTTCTT TGACGACGGA CGAGCTGATT ACGTTCTGCC GTTCGGTGAT CGCCGACTAC
AAATCGCCGC GCAGCATCGA ATTCCGCGAC GACCCGCTGC CGCTGTCGAG CGTCAACAAG
ATCAACAAGG CGGCGCTCCG CGCGCCGTAT TGGAGCGACA AGGATCGGCG AGTGAATTGA
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| Protein sequence | MQLTAGLRKA ASFRADDIAL VTPERSFSHG EVLDRVARLA RVFRRFGIEA GERVAILAAN
GNAYIECYFA VLWAGGVVVP INSRFSLAEM IEQVTDAEPT VLVSDRSFLD SALQLADACR
GITAVIAAAP GAAGPPKLHD YEAVLADEKP CADAGRGGDD LACLFYTGGT TGRAKGVMLS
HRNLWVNAVV TSLSFGFDET TVALHAGPLF HLGAGARVYT TSIMGGRHVV IPRFSPNDVL
AAISQHKVTV ATFVPTMLGM ILQLPDLDSY DLSSLKLITY GASPMPEAVL QACLRRFPSI
RFGQSYGMTE LSPVATILSP ADHLPSAPQN RLRSAGRPIV SAEVRIVDAE DRELKPGEVG
EVVVRGPMVM MGYWKQPELT AHVLRGGWMH TGDSGRFDAD GYLYISDRIK DMIITGGENV
YSIEVEHAIA AHPDVLQCAV IGIPHAKWGE AVHAVVVRRP GSSLTTDELI TFCRSVIADY
KSPRSIEFRD DPLPLSSVNK INKAALRAPY WSDKDRRVN
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