| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1533 |
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| Symbol | |
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| ID | 6409190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1619663 |
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| End bp | 1621060 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711427 |
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| Product | cytochrome bd ubiquinol oxidase subunit I |
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| Protein accession | YP_001990542 |
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| Protein GI | 192289937 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0786665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAGC TCCTCCTCTC CCGACTGCAG TTCGCGTTCA CGATCGGCTA TCACATCCTT
TGGCCGGCCT TCACGATCGG AATCGCATGG TTCATCGTGA TGCTGAGTGC GCTGTGGCTG
CGCACGCACA ACCCGGTTTA TCAGCACCTG GTGCGGTTCT GGACCAAGGT GTTCGCGCTC
GCCTTCGGCA TGGGCGTCGT CACCGGTGTC GTCATTTCGT ATCAGCTCGG ATTGAACTGG
TCCGGCTACG CCCGGGCGAC CGCCGATGCG ATCGGGCCGC TGTTCGTGAT GGAGGTGCTC
ACCGCGTTCT TCCTCGAGGC CGGCTTCATC GGCGTGATGC TGTACGGCCA GGAGAGGGTC
GGGGAGAAAC TGCACTTTGT CGCCTGTCTG ATCGTCGCGA TCGGCACGGT GCTGTCGGCG
TTCTGGATCA TCTCGGCGAA CTCCTGGATG CAGACGCCGA CCGCCTTCAC CACGACAGCC
GATGGCCGTT TCGTCGCCAC CGATTTCTGG GGCGTGGTGT TCAATCCGTC GATGCCCTAC
CGGCTGGCGC ATATGATCAC CGCGAGCTTC ATCACCGGCG GTTTCGTGGT GACCGGCGTC
GCGGCGTTCT GGATCTGGCG CGGGCGACCC GCCGACCAGC CGGCGGCACG CAAGGCGTTT
TCGATCTGCC TGGCTCTGCT CGCGGTGCTG ATGCCGGCGC AGATGCTGAT CGGAGATCAG
CATGGGCTGA ACACCCGCAA GTATCAACCG ATGAAGCTGG CCGCCATCGA GGCGCGCTGG
GACACGGCGC GCCGCGTGCC GATCAACCTG ATCGCGTGGC CGGACGAGAA GGCCGAGCGC
AACGACTACG CCCTCGAGAT CCCGCTGCTG GGCAGCCTGA TTCTGACGCA TTCGCTGAAC
GGCGAGGTCA AGGGCCTGAA GGAAGTGCCG CCGTCGGAAC GCCCGCCGGT GCTGCCCGTA
TTCCTGGCTT TCCGCGTCAT GGTCGGCTGC GGGATGCTGT TGCTTCTGGT CGCTTTCACC
GGCCTGTATC TGCGCTGGCG CGGACGGCTC TACACGACGC GCTGGTACCA GATCGCCTGC
ATGGGTTGCG TCCCGCTCGG CTTCATCGCC ACGCTGGCGG GCTGGGTGGT GACTGAAGTC
GGACGGCAGC CATATGTGAT CTACGGACAT TTCCGCACGG CGGAGGCGGT GTCGCCGATC
GCCACCGGCG CCGTCGCCAG CTCGATGGCG ATCGCCTTCG TCCTCTACAA CTGCCTGCTA
CTCGGCTTCT TCTGGTACGC CGGCCGGCTG GCCTGGCGCG GTCCGATGAG CGGATTGCCG
ACTCATCCGG CCGTGCCGTT GGCGACCGTC GCCGCCGCGC TTGGACAGAC CTCCCCAACC
CCTAAAGGTG CGAAATGA
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| Protein sequence | MDQLLLSRLQ FAFTIGYHIL WPAFTIGIAW FIVMLSALWL RTHNPVYQHL VRFWTKVFAL
AFGMGVVTGV VISYQLGLNW SGYARATADA IGPLFVMEVL TAFFLEAGFI GVMLYGQERV
GEKLHFVACL IVAIGTVLSA FWIISANSWM QTPTAFTTTA DGRFVATDFW GVVFNPSMPY
RLAHMITASF ITGGFVVTGV AAFWIWRGRP ADQPAARKAF SICLALLAVL MPAQMLIGDQ
HGLNTRKYQP MKLAAIEARW DTARRVPINL IAWPDEKAER NDYALEIPLL GSLILTHSLN
GEVKGLKEVP PSERPPVLPV FLAFRVMVGC GMLLLLVAFT GLYLRWRGRL YTTRWYQIAC
MGCVPLGFIA TLAGWVVTEV GRQPYVIYGH FRTAEAVSPI ATGAVASSMA IAFVLYNCLL
LGFFWYAGRL AWRGPMSGLP THPAVPLATV AAALGQTSPT PKGAK
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