Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1520 |
Symbol | |
ID | 6409177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1601971 |
End bp | 1602792 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642711414 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001990529 |
Protein GI | 192289924 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.495724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACCT TCACGACCGC CGATGCCACG AAACTGTACT ACAAGGATTG GGGCAGCGGC CAGCCGGTCG TTTTCAGTCA CGGCTGGCCG CTGTCATCGG ACGCGTTCGA GGACCAGATG TTCTTCCTCG CCCAGCGTGG CTTCCGGGTG ATCGCCCACG ATCGTCGTGG TCATGGCCGA TCGGACCAGC CGTGGACCGG CAACGATATG GATACATACG CTGACGATCT CGCGGCGCTC GTCAAGCATC TCGATCTCGA GAATGCGATC CACGTCGGGC ACTCCACCGG CGGCGGCGAG GTGGCGCGCT ACATCGGCCG TCACGGTGCG GCGCGAGTGG CGAAGGCGGT GCTGATCGGC GCGGTCCCGC CGGTGATGTT GAAGTCCGCG AAGAACCCCG GCGGACTCGA CATCTCGGTG CTCGACGGTC TGCGCGCCGG CGTCACCAGC GATCGCTCTA AATTGTGGAA GGATCTCAGT TTGCCGTTCT ACGGCTACAA CAAGCCGGGC GCGCAGGTTT CCGAGGCGGT GCGCGAGTCG TTCTGGCTGC AGGGCATGAT GGCCGGCTTT CCGGCGGCCT ATTTTTGCAT CAAGGCGTTC TCCGAAACCG ACATGACGGA CGATCTCAAG AAGATCCAGG TTCCGACGCT GGTGTTGCAC GGCGACGCCG ATCAGATCGT GCCGATCGAC GATTCGGCGA AACTCTCGGC GAAGCTGCTG AAGAATTCCG AACTGCAGGT GATTCCCGGC GCGCCGCACG GCATGTGCAC GACCCACAAG GACCTGATCA ACGAGCGGCT GTTCGCGTTC TTCAATAAGT AG
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Protein sequence | MPTFTTADAT KLYYKDWGSG QPVVFSHGWP LSSDAFEDQM FFLAQRGFRV IAHDRRGHGR SDQPWTGNDM DTYADDLAAL VKHLDLENAI HVGHSTGGGE VARYIGRHGA ARVAKAVLIG AVPPVMLKSA KNPGGLDISV LDGLRAGVTS DRSKLWKDLS LPFYGYNKPG AQVSEAVRES FWLQGMMAGF PAAYFCIKAF SETDMTDDLK KIQVPTLVLH GDADQIVPID DSAKLSAKLL KNSELQVIPG APHGMCTTHK DLINERLFAF FNK
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