| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1452 |
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| Symbol | |
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| ID | 6409109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1534213 |
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| End bp | 1536957 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711351 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001990467 |
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| Protein GI | 192289862 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.244915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC TGCTGCAAGC CGACATCAAA GGCCCGAACG ATCAGGCCTC CGACGAGATG
TGGCACGCGA TCGATGCCGA TCGCGTTCTC ACCGGCCTCG CCACCAGCCG AGGCGGCCTC
AGCACCGAAG AGGCCAAACG CCGGCTGCAG AGCTACGGCC CCAATGCGCT GCCAGAGCCG
CCGCGTCGCT CGGCGATTTT GCGGTTTCTG TCGCAGTTCA ACAACACCCT GATCTACTTC
CTGCTCGCGG CCGCGGTCGC AGCCGCATTC CTCGGCCACC AGATCGATGC CGCCGTGATC
GTCGCGGTGG TGACGATCAA CGCCATCGTC GGCTACATCC AGGAAGACAA AGCCGAAAAG
GCGCTGGCCG CGATCAAGAA GATGATCTCG CCGCGCGCGC ATGCCTGGCG TGACGGCCAC
CGCGTCGTGG TGCCGGCTGA AGAACTCGTG CCGGGCGACG TGGTGATGAT CGAAGCCGGC
GATCGCGTGC CGGCGGATTT GCGGCTCACC CGCGCCCGCG GCCTGCTGAT CGACGAGGCA
ATGCTGACCG GCGAGTCGGT GGCCTCCGAA AAGCACGACC AGCCCGCGGC GGTGGACGCG
CCACTCGGCG ACCGGCTGTG CATGGGGTTC TCCGGCACGC TGGTGTCGGC CGGGCAGGGC
TTCGGCGTCG TGGTGGCGAC CGGCGCACGC ACCGAGATCG GCCGCATCAG CACGATGATC
CAGGGCGTCG AGCAACTGGC GACGCCGCTG CTTGCACAGA TCAACAAGTT TGGTGAGCGC
TTCACCTGGG TGGCGATTTC GGCGGCGGCC GCAATCTTCG CCTTCGCCAC GCTGGTGCGC
GACTATGCCT GGGCCGATGC GCTGATCGCT GTGGTGGCGC TCGCGGTCGG CGTGGTGCCG
GAAGGCCTGC CGGCGGTGAT CACCATCACG CTGGCCATCG GCGTGCAGCG GATGGCCAAG
CGCAACGCCA TCATCCGCCG CCTGCCGGCG GTGGAGACCC TCGGCGCCAC CTCGGTGATC
TGCTCCGACA AGACCGGCAC GCTGACGCGC AACGAGATGA CCGCGCGCCG CATCGTCACC
GCCGATCACA CGATCCTGGT CAGCGGCTCC GGCTACGTGC CGAAGGGTGA CCTCACCGTC
GACGGTAACG ATGATCCTGA AGCGGTGTCG TCGGCGATGC AGCTCGTTCG CTCGGCACTG
CTGTGCAACG ACGCGCAGCT GCGCCCGGTC GACGGTCACT ACGTGGTCGA CGGCGATCCG
ATGGAGGGCG CGCTAGTCGC ACTCGGGATC AAGGCCGGGC TCGATCCCGA CACCGAGCGG
GCCGCGTGGA AGCGCTCCGA CGAGATCCCG TTCGACGCGC AGCATCGCTT CATGGCGACC
CGCCACGCCA CCGACTCCGG CGCGCAGGTG ATCTTCGTCA AGGGCGCGCC GGAGCGGCTT
CTGGCGATGT GCGCAACTCA AGTCGGCCCG GGAGGCGCAT TGCATCCGAT CGATCAAGAA
TTCTGGACCG CGCAGATCGC GCGTGCGGCG GCCGAAGGCG AGCGTGTGCT CGGCTTCGCG
CTCCGTTCGC CGGCGCGGCC GTCCGACCAA CTCGGATTTG CCGATCTCGA CGAGGGGCTG
GCGTTCATGG GGCTGGTCGG CTTCATCGAT CCGCCGCGCG ATGAGGTGAT CCAGGCGATC
GCCGAATGCC GCTCCGCCGG CATCGTGGTG AAGATGATCA CCGGTGATCA CGCCGCGACC
GCGGAGGCGA TCGCGCGGCA GCTGAACCTG ACCGACCATC CCGACGTCGT CACCGGGGCC
GATCTCGACC GCACGCCGGA TTCTGCCTTC GTCGAGCTCG CGCGCCGCAC CGATGTGTTC
GCTCGCACCA ACCCGGAGCA TAAGCTGCGC ATCGTGCAGG CGCTGCAGTC CACTGGCGCA
GTGGTGGCGA TGACCGGCGA CGGCGTCAAC GACGCGCCAG CGCTGAAGCA GGCCGATGTC
GGCATCTCGA TGGGCCACAA GGGCACTGAG ACCGCCAAGG AAGCCTCGCA GGTGGTGCTG
CTCGACGACA ACTTCGTCTC GATCGTCGCC GCGGTGCAGG AAGGCCGCAC CGTTTACGAC
AACATCCGCA AAGTCATCGC CTGGACGATC CCGACCAACG GCGGCGAGGT GCTCACGGTC
ATCGTCGCGA TCCTCTTCGG CTTCACCATG CCGATGACGC CGGTGCAGAT CCTCTGGATC
AACCTGATTC TCACCGTCAC GCTCGGCCTC GTGCTGGCGT TCGAGCCGCC GGAGCCTGGC
GTGATGAAGC GGCCGCCGCG GCCGGCGCAC GCGCCGCTGC TGTCGCGCTT CTTGGTGTGG
CGGATCTTTT TCGTCTCGTT CCTGTTCACC GTCGGTGCGC TGGCAATCTT CTTCTTCGCG
CTCGGCAAGG GACTGTCGCT CGACACCGCC CGAACCATGG TGGTGAACGT GCTTGTGGTG
TTCGAGATCT TCTACCTGTT CAACGTCCGC TATCTGCACA CCAGCTCGAT CTCGCTGCGC
GGCGCGCTCG GCACCATGCC GGTGCTGGCC GCGCTTGTCG TGGTGATCGC CGCACAGCTC
GCCTTCACCT ACGCGCCGTT CATGCACAGC CTGTTCGCCA CCACGCCGAT CTCGCTGGTC
GACGGCGCCG TGGTGATCGG CGCCGGCGTG GTGCTGATGA TCGTGCTCGA ACTCGAAAAA
CTGGTGATGC GCAAAATCGG CGCGCTGCGC AGTCTCGAGC CGTAA
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| Protein sequence | MTELLQADIK GPNDQASDEM WHAIDADRVL TGLATSRGGL STEEAKRRLQ SYGPNALPEP
PRRSAILRFL SQFNNTLIYF LLAAAVAAAF LGHQIDAAVI VAVVTINAIV GYIQEDKAEK
ALAAIKKMIS PRAHAWRDGH RVVVPAEELV PGDVVMIEAG DRVPADLRLT RARGLLIDEA
MLTGESVASE KHDQPAAVDA PLGDRLCMGF SGTLVSAGQG FGVVVATGAR TEIGRISTMI
QGVEQLATPL LAQINKFGER FTWVAISAAA AIFAFATLVR DYAWADALIA VVALAVGVVP
EGLPAVITIT LAIGVQRMAK RNAIIRRLPA VETLGATSVI CSDKTGTLTR NEMTARRIVT
ADHTILVSGS GYVPKGDLTV DGNDDPEAVS SAMQLVRSAL LCNDAQLRPV DGHYVVDGDP
MEGALVALGI KAGLDPDTER AAWKRSDEIP FDAQHRFMAT RHATDSGAQV IFVKGAPERL
LAMCATQVGP GGALHPIDQE FWTAQIARAA AEGERVLGFA LRSPARPSDQ LGFADLDEGL
AFMGLVGFID PPRDEVIQAI AECRSAGIVV KMITGDHAAT AEAIARQLNL TDHPDVVTGA
DLDRTPDSAF VELARRTDVF ARTNPEHKLR IVQALQSTGA VVAMTGDGVN DAPALKQADV
GISMGHKGTE TAKEASQVVL LDDNFVSIVA AVQEGRTVYD NIRKVIAWTI PTNGGEVLTV
IVAILFGFTM PMTPVQILWI NLILTVTLGL VLAFEPPEPG VMKRPPRPAH APLLSRFLVW
RIFFVSFLFT VGALAIFFFA LGKGLSLDTA RTMVVNVLVV FEIFYLFNVR YLHTSSISLR
GALGTMPVLA ALVVVIAAQL AFTYAPFMHS LFATTPISLV DGAVVIGAGV VLMIVLELEK
LVMRKIGALR SLEP
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