| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1417 |
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| Symbol | |
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| ID | 6409074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1495991 |
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| End bp | 1497814 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711316 |
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| Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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| Protein accession | YP_001990432 |
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| Protein GI | 192289827 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.301106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACAC CTTGGCAAGC CGCCACCGCC TTGAAGAGCG AAGCCAAGGA GCTTCGCCCG
CTTACCGGTA ACGAAGCGAT TGCGCGTGCC GCCTGGGAAG CGGGCGTTCG TGTCGCCGCT
GCTTATCCTG GTACGCCCAG CACTGAAGTT CTTGAGAATC TTGCGACCTA TCCGGTCGAG
GATTTGCACG CACAGTGGTC GACCAACGAG AAGGTCGCGC TCGACGTCGC GATGGGCGCG
TCGTTCGCGG GGAGCCGCGC ACTGTGTGCG ATGAAGCATG TCGGCCTCAA TGTCGCTGCC
GACGCGTTCA TGACCGCGAC CTACATCGGC GTGAACGGCG GTTTGGTGCT GATTGTTTGC
GACGACCCGG GCATTCACTC GTCGCAGAAC GAGCAGGACA GTCGGATCTA CGGCCAGCTC
GCCAGTATCC CGGTGCTGGA GCCGAGCGAC GCGCAGGAAG CCTACGACTT CACCAAGCTG
GCGTTCGAGA TTTCTGAGCA GTTCGACACC CCGGTGATCG TACGCAGCAC CACGCGTCTG
TCGCACACCC GCAGCACGGT GTCGGTCGGC GAGCGCGTCG AGATGCCGCC GCGTGTCTTC
CTGGAGCGGC CGTCGAAGAA CGTGATGATT CCGGCGCACG CCCGCGGTCG GCATCTGTTC
GTGTTGGAGC GCGAGGCCAA GCTGAAGGAC TATCTCGCCG CCGCCGACAT TACCCGGGTC
GAGAAGGGCG ATACCAAGTT CGGCGTCGTC ACCGCCGGCA CCTGCTATCC TTATCTTCGC
GAAGTTCTGC CGAATGCCAC CGTGCTGAAG CTCGGTGCGT CCTGGCCGCT GCCCGACACG
CTGCTGCGTG AATTCTGCGC CTCGGTCGAT CAGGTGTTCG TGGTCGAGGA GCTTGAGCCG
ATCATCGAGA AGGAGGTCGC CTCGCTCGGC ATCAAGGTCG AGGGCAAGCG GCTGTTCCCG
CGCGCAGGCG AGTTCTCGCC CGAGGTGGTT CGCGCCGGGT TCGTGCAGGC CGGCCTGCTG
CCGGCGCCGC CGTCGTACAA CGCCTGGGTG CCGGAACCGG TGGTACGTCC GCCGGTACTT
TGCGCCGGCT GCCCGCATAC GTCGAGCTTC CTGGCAGTGC GCGCCTCCGG CGCCCGCGTT
GCCGGCGACA TCGGCTGCTA CACGCTGGCG GTGCTCGACC CCTTGCGCGG TATCGACACC
TGCGTGGCGA TGGGCTCCTC GATCGGCAAC GCCATCGGCA TGGCGAAGGC CGGCGAGGCC
AAGCCGGTGG TCGCCACCAT CGGCGACTCC ACCTTCCTGC ATGCCGGGCT GCCGGCGCTG
ATCGATGCAG TCTACAACCA GGCCAACATC GCGGTGGTGC TGCTCGACAA CCACATTACG
GCGATGACCG GCGGCCAGGA GCATCCCGGC ACGGGCAAGA CACTACGCGG CGAACCCGCG
CCGCAGGTCG ACTATGAAGC GCTTATCAAG GCGTGCGGCG TCAAATGGGT GAAGAAGGTC
GACTCCTACG ACCTCGCAGC CACCCATCAG GCGCTGCGCG AGGCGATCAA TTATCGCGGC
GTCGCTGTGC TGATCTCGAA CCGGCCGTGC GTGCTCGATC CAATCAAGAT CAAGGGCCCG
CCGCTGGAAG TCATCACCAG CCAGTGCACC GCCTGTCAGT CCTGCATGAA TCTCGGCTGT
CCGGCGCTGA CCTGGAGCGA CGAATGGTTC GAGGGGCGGC ATCGGGTGAA GATCGACCCG
GCGCTGTGCA TCGGCTGCAC GCTATGCGCC CAGGTCTGCA CCATCGACTG CATCAAGATC
GCGACCCCGG CGGTGACGCA ATGA
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| Protein sequence | MHTPWQAATA LKSEAKELRP LTGNEAIARA AWEAGVRVAA AYPGTPSTEV LENLATYPVE
DLHAQWSTNE KVALDVAMGA SFAGSRALCA MKHVGLNVAA DAFMTATYIG VNGGLVLIVC
DDPGIHSSQN EQDSRIYGQL ASIPVLEPSD AQEAYDFTKL AFEISEQFDT PVIVRSTTRL
SHTRSTVSVG ERVEMPPRVF LERPSKNVMI PAHARGRHLF VLEREAKLKD YLAAADITRV
EKGDTKFGVV TAGTCYPYLR EVLPNATVLK LGASWPLPDT LLREFCASVD QVFVVEELEP
IIEKEVASLG IKVEGKRLFP RAGEFSPEVV RAGFVQAGLL PAPPSYNAWV PEPVVRPPVL
CAGCPHTSSF LAVRASGARV AGDIGCYTLA VLDPLRGIDT CVAMGSSIGN AIGMAKAGEA
KPVVATIGDS TFLHAGLPAL IDAVYNQANI AVVLLDNHIT AMTGGQEHPG TGKTLRGEPA
PQVDYEALIK ACGVKWVKKV DSYDLAATHQ ALREAINYRG VAVLISNRPC VLDPIKIKGP
PLEVITSQCT ACQSCMNLGC PALTWSDEWF EGRHRVKIDP ALCIGCTLCA QVCTIDCIKI
ATPAVTQ
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