| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1409 |
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| Symbol | |
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| ID | 6409066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1486712 |
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| End bp | 1487653 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711308 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001990424 |
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| Protein GI | 192289819 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0709141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGCT ATCTGATCCG TCGTTTGCTG GCGGCCATCC CGGTGATGGG TGTGGTCGCA
CTGTTCGTGT TCCTGCTGCT GCGCCTGACA CCGGGCGATC CCGCCGCGAT CATTGCCGGC
GACAGCGCCA CCCCTGAACA ATTGATGCGC ATCCGTACGT CGCTCGGGCT CAACGAGCCG
CTCTACGTGC AGTTCTTCAC CTGGATCGGA CGGCTGCTGC ACGGCGACCT CGGCGTCTCG
CTGATCTCGC AGGTGCCGGT GCTGCAGATG ATCAGCCAGC GTATCGAGCC GACCATCACG
GTGGCGCTGT CGACCATCGT GCTGTCGGTC ATCGTCGCGA TTCCGCTCGG CGTCGTCGCC
GCGTGGAAAC ACGGCACCTG GGTCGACCGC TTCGTGATGG GCCTGTCCGT GATCGGCTTC
TCGGTGCCGG TGTTCGTGAT CGGCTACGTG CTGATCCAGA TCTTCGCGAT CGAGCTGCGC
TGGCTGCCGG TGCAGGGCTT CCGCCCGATG GCGCGCGGCT TCGGTCCATT TGCCGAGCGG
CTGGTGCTGC CGACGCTGAC GCTGTCCTTC ATCTACATCG CGCTGATCGC ACGAATGACG
CGGGCGGCGA TGCTCGACGT GCTGGGCGAG GACTATGTCC GCACGGCGCG CGCCAAGGGC
ATCAACGAAA GCCGCGTGCT GCTGCGCCAC GCGCTGCGCA ATGCGGCGGT CCCGGTAATC
ACCGTGATCG GCACAGGCTT TGCGCTGTTG ATCTCCGGCG TCGTCGTCAC CGAGAGCGTG
TTCAACCTGC CCGGCATCGG CCGCCTCACC GTCGACGCGG TGCTGGCGCG CGACTACCCG
GTGATTCAGG GCATGATCCT GCTGACCAGC GGCATCTACG TCGCCGTCAA TCTGTTGATC
GATCTGGCCT ACACGCTGCT CGATCCCCGT ATCCGGTACT GA
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| Protein sequence | MLGYLIRRLL AAIPVMGVVA LFVFLLLRLT PGDPAAIIAG DSATPEQLMR IRTSLGLNEP
LYVQFFTWIG RLLHGDLGVS LISQVPVLQM ISQRIEPTIT VALSTIVLSV IVAIPLGVVA
AWKHGTWVDR FVMGLSVIGF SVPVFVIGYV LIQIFAIELR WLPVQGFRPM ARGFGPFAER
LVLPTLTLSF IYIALIARMT RAAMLDVLGE DYVRTARAKG INESRVLLRH ALRNAAVPVI
TVIGTGFALL ISGVVVTESV FNLPGIGRLT VDAVLARDYP VIQGMILLTS GIYVAVNLLI
DLAYTLLDPR IRY
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