| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1389 |
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| Symbol | |
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| ID | 6409046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1462588 |
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| End bp | 1463226 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711288 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001990404 |
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| Protein GI | 192289799 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACC CTACGATCAG ACCACAGAGT GAGTTAACGC CCGGTGATTT CACTGCGGCA
GAGAATCCGT TTGCGCTGTT CGCTGAATGG CTTGCGGAAG CCAACAAGTC CGAACCCAAC
GATCCGAACG CGATGGCGCT GGCGACGGTC GATCCGGACG GCCTGCCCGA CGTGCGCATG
GTTCTAATGA AGGGCTATGA CGAGCACGGT TTCGTGTTCT ACAGCCACAT TGCTAGTCAG
AAGGGCCGCG AGCTGGCCGC CAATCCGAAG GCCGCGCTGC TGTTTCATTG GAAATCGCTG
CGCCGGCAGA TTCGGATTCG CGGCACCGTG ACCCCGGTGA CCGACACCGA GGCCGACGCC
TATTTCGCGA CCCGGCCGAA GCAGGCGCAG ATCGGCGCCT GGGCGAGCAA GCAGTCGCAG
CCGCTGGAAA GCCGGTTCGC GTTCGAGCAG GCGATCGCCA AGGTGACGGC GCGCCATCTG
ATCGGCGACG TCCCGCGGCC GCCTGGCTGG AGCGGCTGGC GGATCACGCC GAGCCGGATC
GAGTTTTGGC ACGACCGTCC GTTCCGCCTG CACGACCGCA TCGAATTTCG CCGGGACACC
CCGGATCACC CCTGGACCAA GACAAGGCTG TATCCATGA
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| Protein sequence | MSDPTIRPQS ELTPGDFTAA ENPFALFAEW LAEANKSEPN DPNAMALATV DPDGLPDVRM
VLMKGYDEHG FVFYSHIASQ KGRELAANPK AALLFHWKSL RRQIRIRGTV TPVTDTEADA
YFATRPKQAQ IGAWASKQSQ PLESRFAFEQ AIAKVTARHL IGDVPRPPGW SGWRITPSRI
EFWHDRPFRL HDRIEFRRDT PDHPWTKTRL YP
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