Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1364 |
Symbol | |
ID | 6409021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1437358 |
End bp | 1437573 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642711263 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_001990379 |
Protein GI | 192289774 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.185476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGA CGGGAACGGT GAAGTTCTTC AACGGCGAGC GCGGCTACGG CTTCATCAAG CCTGATGACG GTGGCCGCGA TGTGTTCGTA CACATTACCG CAGTCGAACG GGCCGGCTTG AAAGACTTGA CCGAGGGACA GCGTATTTCA TTCGAAGTGG AGCCTGACAA GAAGGGCAAA GGCCCCAAGG CGGTCAACTT GGTGATCTCG CCGTAA
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Protein sequence | MAMTGTVKFF NGERGYGFIK PDDGGRDVFV HITAVERAGL KDLTEGQRIS FEVEPDKKGK GPKAVNLVIS P
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