Gene Rpal_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1363 
Symbol 
ID6409020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1436316 
End bp1436939 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID642711262 
Productputative outer-membrane immunogenic protein precursor 
Protein accessionYP_001990378 
Protein GI192289773 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.76499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAG TTACACTGGC AGCGGCGGCC GTGATCGCCG CAAGCGTGTC GACGGCTCAG 
GCGGCCGACA TGGGTTACTA CCGGTCGAAC GCGCCCTATA CGGTCAATCA GCCGCTCAAC 
GCCTTCAGCT GGGCCGGCCC CTATCTCGGC GGCAACCTCG GCTACTCCTG GGGCAACGTC 
ACCAACAACA TCACCAAGCC GTCGGGCTTC TCCGGCGGCG TGCAGGGCGG CTACAACTGG 
CAGTCCGGCA ACATCGTGTT CGGTCTCGAG GGCGACATTC AGTTCTCGAC CGCCGACGAC 
ACCTTCGCGC AGTACAAGTT CTCGAACCCA TGGTTCGGCA CCGGCCGCGG CCGCATCGGC 
TACGCGATGA ACGACGTGCT GATCTACGCC ACCGGCGGTC TGGCGTTCGG CCAGCTCAAG 
GGCCAGAACG TGTTCGCCTC GGAAAGCCAC AGCTCTGCGG GCTGGACGGT CGGCGCCGGT 
GCCGAGTTCG CCTTCGCTCC GAAGCTGAGC GCCAAGGTCG AGTATTTGTA TATGAGCCTG 
TCGACCAGCA ATTTCTTCAT CACTGGCATG CCGAACGGCT ACAACGCCGG GTTGGTCCGC 
GCCGGCATCA ACTATCACTT CTAA
 
Protein sequence
MRKVTLAAAA VIAASVSTAQ AADMGYYRSN APYTVNQPLN AFSWAGPYLG GNLGYSWGNV 
TNNITKPSGF SGGVQGGYNW QSGNIVFGLE GDIQFSTADD TFAQYKFSNP WFGTGRGRIG 
YAMNDVLIYA TGGLAFGQLK GQNVFASESH SSAGWTVGAG AEFAFAPKLS AKVEYLYMSL 
STSNFFITGM PNGYNAGLVR AGINYHF