Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1331 |
Symbol | groEL |
ID | 6408988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1403319 |
End bp | 1404962 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711230 |
Product | chaperonin GroEL |
Protein accession | YP_001990346 |
Protein GI | 192289741 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCTA AAGACGTCAA GTTTGCCGGC GATGCCCGCG ACCGCATGCT GCGCGGCGTG GACGTGCTCG CCAACGCCGT GAAGGTCACG CTCGGTCCGA AGGGCCGGAA CGTGCTGATC GAGAAGAGCT TCGGTGCCCC GCGCATCACC AAGGACGGCG TCACCGTCGC CAAGGAAGTG GAGCTCGAGG ACAAGTTCGA GAACATGGGC GCGCAGATGG TGCGCGAGGT GGCCTCGAAG ACCAACGACC TCGCCGGCGA CGGCACCACC ACCGCCACCG TGCTGGCCCA GGCGATCGTC CGTGAGGGCG CCAAGGCCGT CGCGGCCGGC ATGAACCCGA TGGACCTGAA GCGCGGCATC GAGATCGCGG TCGCGGCCGT GGTCAAGGAC ATCCAGAAGC GCGCCAAGCC GGTCGCCTCC TCGGCTGAAA TCGCCCAGGT CGGCACCATC TCGGCCAACG GCGACGCGCC GATCGGCAAG ATGATCGCCC AGGCGATGCA GAAGGTCGGC AACGAGGGTG TCATCACGGT CGAAGAGAAC AAGTCGCTCG AGACCGAAGT CGACATCGTC GAAGGCATGA AGTTCGACCG CGGCTATCTG TCGCCGTACT TCGTGACCAA CGCCGAAAAG ATGACCGTCG AACTCGACGA CGCCTACATC CTGCTGCACG AGAAGAAGCT CTCGGGCCTG CAGTCGATGC TGCCGGTGCT CGAAGCGGTG GTGCAGTCGG GCAAGCCGCT GCTGATCATC GCCGAGGACG TCGAAGGCGA AGCGCTCGCG ACCCTCGTGG TCAACCGCCT GCGCGGCGGC CTCAAGGTTT CGGCCGTGAA GGCGCCGGGC TTCGGCGATC GCCGCAAGGC GATGCTGGAA GACATCGCGA TCCTGACCGG CGGCCAGCTG ATCTCGGAAG ACCTCGGCAT CAAGCTCGAG ACCGTGACGC TGAAGATGCT CGGCCGCGCC AAGAAGGTGG TGATCGACAA GGAGAACACC ACCATCGTCA ACGGCGCCGG CAAGAAGCCG GAGATCGAGG CCCGCGTTTC GCAGATCAAG GCGCAGATCG AGGAAACCTC CTCGGACTAC GACCGTGAGA AGCTGCAGGA GCGTCTGGCC AAGCTCGCGG GCGGCGTCGC GGTGATCCGC GTCGGCGGCG CGACCGAAGT CGAGGTCAAG GAGAAGAAGG ACCGTGTCGA GGACGCGCTG AACGCGACCC GCGCTGCGGT TCAGGAAGGC ATCGTGCCGG GCGGCGGCGT CGCCCTGCTG CGCGCCAAGA AGGCCGTCGG CCGCATCAGC AACGACAATC CGGACGTCCA GGCCGGCATC AACATCGTGC TGAAGGCGCT CGAAGCTCCG ATCCGCCAGA TCGCCGAGAA CGCCGGTGTC GAAGGCTCGA TCGTGGTCGG CAAGATCCTC GAGAACAAGA CCGAGACGTT CGGCTTCGAC GCCCAGACCG AGGAATATGT CGACATGCTC GCCAAGGGTA TCGTCGATCC GGCCAAGGTC GTGCGCACCG CGCTGCAGGA CGCCTCGTCG GTCGCCTCGC TGCTGGTCAC CACCGAAGCG ATGGTCGCCG AGCTGCCGAA GGCCGACGCT CCGGCAATGC CGGCCGGTGG TGGCATGGGC GGTATGGGCG GCATGGGCTT CTAA
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Protein sequence | MAAKDVKFAG DARDRMLRGV DVLANAVKVT LGPKGRNVLI EKSFGAPRIT KDGVTVAKEV ELEDKFENMG AQMVREVASK TNDLAGDGTT TATVLAQAIV REGAKAVAAG MNPMDLKRGI EIAVAAVVKD IQKRAKPVAS SAEIAQVGTI SANGDAPIGK MIAQAMQKVG NEGVITVEEN KSLETEVDIV EGMKFDRGYL SPYFVTNAEK MTVELDDAYI LLHEKKLSGL QSMLPVLEAV VQSGKPLLII AEDVEGEALA TLVVNRLRGG LKVSAVKAPG FGDRRKAMLE DIAILTGGQL ISEDLGIKLE TVTLKMLGRA KKVVIDKENT TIVNGAGKKP EIEARVSQIK AQIEETSSDY DREKLQERLA KLAGGVAVIR VGGATEVEVK EKKDRVEDAL NATRAAVQEG IVPGGGVALL RAKKAVGRIS NDNPDVQAGI NIVLKALEAP IRQIAENAGV EGSIVVGKIL ENKTETFGFD AQTEEYVDML AKGIVDPAKV VRTALQDASS VASLLVTTEA MVAELPKADA PAMPAGGGMG GMGGMGF
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