Gene Rpal_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1318 
Symbol 
ID6408975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1387115 
End bp1387864 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID642711217 
ProductAzlC family protein 
Protein accessionYP_001990333 
Protein GI192289728 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTC ACGTCCCCAA GGCGCCGGCC TATTGGTCGC GCGACGCAAT CTGGCCCGGC 
ATCGTCGCGG TCGGGCCGAT GCTGCCCGGC ACGCTGGCGT TCGGCATGGC GTTCGGCGCG
CTGTGTGCGC AGAAGAACTT CACGCTGGCC GAGGTCGAAG TGATGATGGC CACCGTCTAT
GGAGGACTGT CGCAGTTCGT CGCGGTCCAG GCTTGGCCAG ATCAGCTGAC GCCGTCGACG
ATCGCAGCGC TGGCGCTGCT CACCACCACC GTCAACATCC GCTTCTTCCT GATGACGGCG
TCGATGCGGC CGTGGTTCGG CACGCTGCCG GCGTGGCAGG CTTATCCGCC GCTGCTGCTG
GTCACCGATG GCGGATGGCT CGCAGCGATG CGTTATCGTG AACATGGCGG CGCCAATGCC
TGGTTCTACC TCGGCGGCGC GTTGGTTCTG TATCTTGTGT GGCTGGTGTC GGCGATTCCG
GGTTTTCTGC TCGCCGAACA GCTCGCTGAT CCGAAGAAGT TCGGCGTCGA CATCGCGATG
CCGGCGTTCT TCGCGGCGCT CTTGGTACCA GCCTGGAAGG GGCCGCGCCG GGCGATTCCT
TGGCTCGTGT CGGGGATCGT CGCCCTGACG GTGCATTGGC TGATCCCGGG CTATTGGTTC
ATCATTGCCG GCGCGCTGTC AGGTGCGATC ACTGCCGGAC TGATGGATGA GCCGCCAGTG
GCGACGTCCC ACGCGGGGCA TTCGTCATGA
 
Protein sequence
MTTHVPKAPA YWSRDAIWPG IVAVGPMLPG TLAFGMAFGA LCAQKNFTLA EVEVMMATVY 
GGLSQFVAVQ AWPDQLTPST IAALALLTTT VNIRFFLMTA SMRPWFGTLP AWQAYPPLLL
VTDGGWLAAM RYREHGGANA WFYLGGALVL YLVWLVSAIP GFLLAEQLAD PKKFGVDIAM
PAFFAALLVP AWKGPRRAIP WLVSGIVALT VHWLIPGYWF IIAGALSGAI TAGLMDEPPV
ATSHAGHSS