Gene Rpal_1289 details

Gene Information

• Locus tag: Rpal_1289
• Symbol: ruvC
• ID: 6408946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1360115
• End bp: 1360639
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 642711188
• Product: Holliday junction resolvase
• Protein accession: YP_001990304
• Protein GI: 192289699
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCAG TCTCGATTCG TCGCCCGATC CGCATCCTCG GCATCGACCC CGGCCTTCGC 
CGCACCGGCT GGGGGGTGGT CGACAGCGAT GGCAATCGGC TGGTCTATGT CGCGTGCGGC 
TCGGTCGAGC CGCGGGATAC GCTGCCGCTG GCTGAGCGGC TGCTGGCGAT TCATGATGGG 
CTGGCGAAAG TGCTGGCCGC CCACGCGCCG GCTGAGGCCG CGGTCGAGCA GACCTTCGTC 
AACAAGGACG GCGCCGCGAC GCTGAAGCTC GGCCAGGCGC GCGGCGTGGC GATGCTGGTG 
CCGGCGATGC ATGGCCTCTT GGTCGCGGAA TACGCGCCTA ATCTCGTCAA GAAAACCGTG 
GTCGGTGCCG GCCATGCCGA CAAGACCCAG ATCCAGATGA TGCTGAAGAT CCTGCTGCCC 
AAGGCCGATC CGAAAACCGC CGACGCCGCC GACGCCCTCG CCATCGCCAT CACCCACGCC 
CACCACCGCG GCGCCGCGCA GCGGCTGAAG GCGGTGGGGG CATGA 

 

Protein sequence

MTAVSIRRPI RILGIDPGLR RTGWGVVDSD GNRLVYVACG SVEPRDTLPL AERLLAIHDG 
LAKVLAAHAP AEAAVEQTFV NKDGAATLKL GQARGVAMLV PAMHGLLVAE YAPNLVKKTV 
VGAGHADKTQ IQMMLKILLP KADPKTADAA DALAIAITHA HHRGAAQRLK AVGA