Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1285 |
Symbol | |
ID | 6408942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1355922 |
End bp | 1356854 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711184 |
Product | beta-lactamase domain protein |
Protein accession | YP_001990300 |
Protein GI | 192289695 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACG AGAGCGAACC TTCGGACGAC GTTCCGTTCA ATCGCGAGTT CGGGCTGCAG CCGGGCATCG TCGAGGAAAT CCGTCCCGGC TTGCGCCGCG TGTTGTGCAA CAACCCGTCG CCGTTCACTT TCACCGGCAC CGTCAGCTAC ATCGTCGGCC GCGGCAAGGT CGCGATCATC GATCCGGGGC CTGCGGACGA GGCCCATGCC AATGCCCTGC TGGACGCCGT CAAAGGCGAA ACCGTCACGC ACATCCTGGT CACCCACACC CACAAGGATC ATTCACCCGG CACGCCGCTG ATCAAGCAGG CGACTGGCGC CACCGTCTAT GCCGAAGGTC CGCACCGCGC GTCGCGGCCG TATTTCGAGA GCGAGACGGT GTCGACCGAG TCCGGCGCCG ACCGCAACTT CAAGCCGGAT GTCGAGATCC GCGACGGCGA TATGATCGAA GGCGATGGCT GGACCATTGA ATCTGTGGCG ACGCCCGGCC ACACCGCCAA CCACATGGCG TTCGCCTGGC GCGAAGGGGA TGCGCTGTTC GTCGGCGATC ACATCATGGG CTGGTCGACC ACTATCGTGG CGCCGCCGGA CGGCTCGATG CCGGACTACA TGGCGTCGCT CGAGCGGCTG ATCGGCCGCG ACGAACAACT CTATCTCTCC GGCCACGGCG CCGAGATTCC CGAAGGCCCG CGCTATTCGC GGTTCCTGAA GCGGCACCGG CTGGCGCGTG AGGCTTCGAT CCTGCATCGC CTCGGCAAGG GCGAGACCGA TATCCCCAGC ATGGTGCGGG CGATCTATAT CGGCATCGAC CCGCGGCTCG TCGGCGCCGC GGGTTACTCG GTGTTGGCGC ATCTGGAAGA TCTGGTGATG CGCGGCGTCG TCGCCACCGA GGGCGACCCG GTGATCAGCG GCCGCTACCG CCTCGCCGGT TAG
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Protein sequence | MSDESEPSDD VPFNREFGLQ PGIVEEIRPG LRRVLCNNPS PFTFTGTVSY IVGRGKVAII DPGPADEAHA NALLDAVKGE TVTHILVTHT HKDHSPGTPL IKQATGATVY AEGPHRASRP YFESETVSTE SGADRNFKPD VEIRDGDMIE GDGWTIESVA TPGHTANHMA FAWREGDALF VGDHIMGWST TIVAPPDGSM PDYMASLERL IGRDEQLYLS GHGAEIPEGP RYSRFLKRHR LAREASILHR LGKGETDIPS MVRAIYIGID PRLVGAAGYS VLAHLEDLVM RGVVATEGDP VISGRYRLAG
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