Gene Rpal_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1285 
Symbol 
ID6408942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1355922 
End bp1356854 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID642711184 
Productbeta-lactamase domain protein 
Protein accessionYP_001990300 
Protein GI192289695 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG AGAGCGAACC TTCGGACGAC GTTCCGTTCA ATCGCGAGTT CGGGCTGCAG 
CCGGGCATCG TCGAGGAAAT CCGTCCCGGC TTGCGCCGCG TGTTGTGCAA CAACCCGTCG
CCGTTCACTT TCACCGGCAC CGTCAGCTAC ATCGTCGGCC GCGGCAAGGT CGCGATCATC
GATCCGGGGC CTGCGGACGA GGCCCATGCC AATGCCCTGC TGGACGCCGT CAAAGGCGAA
ACCGTCACGC ACATCCTGGT CACCCACACC CACAAGGATC ATTCACCCGG CACGCCGCTG
ATCAAGCAGG CGACTGGCGC CACCGTCTAT GCCGAAGGTC CGCACCGCGC GTCGCGGCCG
TATTTCGAGA GCGAGACGGT GTCGACCGAG TCCGGCGCCG ACCGCAACTT CAAGCCGGAT
GTCGAGATCC GCGACGGCGA TATGATCGAA GGCGATGGCT GGACCATTGA ATCTGTGGCG
ACGCCCGGCC ACACCGCCAA CCACATGGCG TTCGCCTGGC GCGAAGGGGA TGCGCTGTTC
GTCGGCGATC ACATCATGGG CTGGTCGACC ACTATCGTGG CGCCGCCGGA CGGCTCGATG
CCGGACTACA TGGCGTCGCT CGAGCGGCTG ATCGGCCGCG ACGAACAACT CTATCTCTCC
GGCCACGGCG CCGAGATTCC CGAAGGCCCG CGCTATTCGC GGTTCCTGAA GCGGCACCGG
CTGGCGCGTG AGGCTTCGAT CCTGCATCGC CTCGGCAAGG GCGAGACCGA TATCCCCAGC
ATGGTGCGGG CGATCTATAT CGGCATCGAC CCGCGGCTCG TCGGCGCCGC GGGTTACTCG
GTGTTGGCGC ATCTGGAAGA TCTGGTGATG CGCGGCGTCG TCGCCACCGA GGGCGACCCG
GTGATCAGCG GCCGCTACCG CCTCGCCGGT TAG
 
Protein sequence
MSDESEPSDD VPFNREFGLQ PGIVEEIRPG LRRVLCNNPS PFTFTGTVSY IVGRGKVAII 
DPGPADEAHA NALLDAVKGE TVTHILVTHT HKDHSPGTPL IKQATGATVY AEGPHRASRP
YFESETVSTE SGADRNFKPD VEIRDGDMIE GDGWTIESVA TPGHTANHMA FAWREGDALF
VGDHIMGWST TIVAPPDGSM PDYMASLERL IGRDEQLYLS GHGAEIPEGP RYSRFLKRHR
LAREASILHR LGKGETDIPS MVRAIYIGID PRLVGAAGYS VLAHLEDLVM RGVVATEGDP
VISGRYRLAG