| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1277 |
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| Symbol | |
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| ID | 6408934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1350018 |
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| End bp | 1350812 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642711176 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001990292 |
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| Protein GI | 192289687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGC GCGCGCTTCT CGCCTGGCTG GCAACTGCGG CACTTGCTGC CGTGACGGCC
TGTGCGAGCT GCGGCGGCGC AATGGCGCAG CAGCGCATCG CCGATACCGG CGGCTTGGTG
GTGACCGCGC GCGCCGGAGA ATCGTCTTTT GATGCACCCG CCGCGCCAAC GGTGCCATGG
GCGCAAGTGA TTGCGCAGGC CGCGCAGGAC AATGGCCTGC CTCCCGCATT CCTGACCCGG
CTGCTCAATC AGGAAAGCAC CATGTTCACG CTCGCGGTGA GCCGCGCCGG CGCCATGGGC
ATCGCGCAGT TCATGCCCGG CACGGCCGCC GCGCGCGGGC TCGACGATCC ATTCGACCCG
TTCAAGGCGA TCCCGGCCGC CGCGCGCTAT CTCGCCGACC TACGCCGCCA GTTCGGCAAT
CTCGGCCTCG CCGCCGCCGC CTATAATGCC GGCGCTGGCC GGGTGTCGTC TTGGCTGCGC
GGAACCTCGG AATTGCCGGC CGAAACCCGC GACTACGTGC TGCGCATCAC CGGCTCCAGT
GCAGAGGATT GGGCTGCCAA TCGTGCCGAT GCGTCGGCGA TCAGCGCCGG CGTGCCGGCC
CGGCCGCCGA TCGTCTCACC GGCCGTTGCC GCGACGACAC GCGTGCTTCC GGCGGTCCCG
GCACCTGCCG CTCCGCGCGC TGCCAACCGC GCAGAGCGCG GCCGCGCGAG TGCGAAGAAG
CCGACCGCCG AAGCTGAGCT GTGCGCTTCC GTTGCCGCCG GTGGCCGCGG CTGCATCCTG
CAGACGGCAT ATTGA
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| Protein sequence | MATRALLAWL ATAALAAVTA CASCGGAMAQ QRIADTGGLV VTARAGESSF DAPAAPTVPW
AQVIAQAAQD NGLPPAFLTR LLNQESTMFT LAVSRAGAMG IAQFMPGTAA ARGLDDPFDP
FKAIPAAARY LADLRRQFGN LGLAAAAYNA GAGRVSSWLR GTSELPAETR DYVLRITGSS
AEDWAANRAD ASAISAGVPA RPPIVSPAVA ATTRVLPAVP APAAPRAANR AERGRASAKK
PTAEAELCAS VAAGGRGCIL QTAY
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