Gene Rpal_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1276 
Symbol 
ID6408933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1349074 
End bp1350015 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID642711175 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001990291 
Protein GI192289686 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACGTT ATTTCAGATC GATCATTGGT GTCGCCGCGG TGGCGGCTCT GCTCGCGGGC 
TGCTCGCGCC CCGGTCATCG CGACAGCTTC TTCGAGGAGC CGCCGGTCGT GACTCCGCCG
TCGCCGACCG CTGTCAATCT CGAGACGCTC CCGCCGCCGA AGCAGAAGAT CGACATCGCG
ATCTATCAAT TCCCCGATCT CACCGGCAAG AACGAGCCAA ACGACAACGT CGCAGTATTC
TCGCGCGCTG TGACCCAGGG CGGCGCCGGA CTGGCGATCG ATGCGCTGAA GCGCGCCGGT
GGTGGGGCTT GGTTCCGCGT CGTCGAGCGC AATGGCCTCA ACGACCTGCT GCAGGAGCGG
CAGCTTGTCC GCGCCACTCG CCAGGAGTTC GACCGCGACC GCGCCAAGCC CCTGCCGCCG
ATGCGCTTCG CCGGACTCCT GATCGAGGGC GGCATCGTCG CCTTCGACGC CAACTACATG
ACCGGCGGCA TCGGCGCCAA CTATCTCGGC ATCGGCGCCG ACACCAAGTT TCGCCGCGAC
ATGGTCACCG TCGCCCTGCG GGTCGCCTCG GTGCAGACCG GCGAGGTGCT GACCAGCGTC
ACCACCACGA AGACGGTGTA CTCGGTGTCG TTGCAGGGCA ACACGTACAA ATACGTCGCG
CTCGACAAGC TGCTGCAGAT CGAAGCCGGC ATCACCCGCA CCGAGCCGAC CCAGCTTGCG
GTGCGGCAGG CGATCGACCT CGCAGTGTAT TCCACCATCA TGGAGGGCGC GCGCGACAAG
CTGTGGCGGT TCGCCGATCC GGCGATGGAG GCCAAGCTGA TCCGCGACTA TCTCGACCGC
GACAAGCCGC AGCCGGCTTT CATGAAGCCG TATCTCACCA AGGAGGAGCG GATCGAGGCG
GAGAAGATCG ATCATTCGCC GGAATGGGCA CCGCGGAGCT GA
 
Protein sequence
MTRYFRSIIG VAAVAALLAG CSRPGHRDSF FEEPPVVTPP SPTAVNLETL PPPKQKIDIA 
IYQFPDLTGK NEPNDNVAVF SRAVTQGGAG LAIDALKRAG GGAWFRVVER NGLNDLLQER
QLVRATRQEF DRDRAKPLPP MRFAGLLIEG GIVAFDANYM TGGIGANYLG IGADTKFRRD
MVTVALRVAS VQTGEVLTSV TTTKTVYSVS LQGNTYKYVA LDKLLQIEAG ITRTEPTQLA
VRQAIDLAVY STIMEGARDK LWRFADPAME AKLIRDYLDR DKPQPAFMKP YLTKEERIEA
EKIDHSPEWA PRS