Gene Rpal_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1272 
Symbol 
ID6408929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1346352 
End bp1347686 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content58% 
IMG OID642711171 
ProductCurlin associated repeat protein 
Protein accessionYP_001990287 
Protein GI192289682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTA ATCTGTTTTT TGTAACGGCC AGCGTGCTGG CGTTGTCTTC GAGTGCTGCG 
TTCGCTGCGG ACTCCAACAC GGTGTACCTG AACCAGTCTG GCGACAATCA GAAGGCTGAC
GTCTCGCAGT CCGGTAACGG CAACAGTGTC GGCGCCTTCA ATGGCAACTC GGGATTCACT
CAGGAAAATG GAACGTTATC GGGAGCGAAC ATTCTCACGG TGACGCAGTC CGGAAACTCC
AACAGCGTCG GCCGCGACAT CCAGGGCAAG CAATCCGGTG CTGGCAACTC TGCCGCGATC
GTTCAGGAAG GTGCCAGTAG CGACGTCGAG CTTCAGCAGA CCGGCACCAG CAATGGCGCC
GTTCCGTCCG GCTGGAACTG GACCAACGAT CCGGGTGTCT TCAACAAGAT TACTCAGGAT
TCGTCGTCGA ACGGAAGCAA GGTTTCCGTC ATCCAGGATG GGAAGAACAA CGTCTTCAGC
ATCAAGCAGG GCAATACCGG CAACTCGACC TCGGTCAATC AAATCGGCGA GTGGGGCATG
GCCTATGTTC GTCAGGGCAT CGGCGCAGCC GAGACCGATG CCTCTACGGG CAATGCGCTG
CCGACCGGTG GCAACTACAA CGTCGCCTCG ATCACGCAGA ACAGCGCCGG CCTGAATTAT
GCGGTCGCCG TGCAGGGCGG CGGCAATTCG AACTCTCTGT CGATCAGCCA GTCGGGAAAT
CTGCAGGGCG CCAACGCCTG GCAGAACGGT AACGCGAACG TCTTCAGCTC GATCCAAACG
AATGTCGGGA ACGTCGTCGG CTTGACGGGA GGTATCTACG GCACCGACAG CCCGATCACG
CAGACCGGTG ACAACAACAC CTACATCAAC ACCCAGACCG GGTCGTCCAA CAGCGCCAAC
GGCTCCCAGA CCGGCAACTT CAACCAAGTG TTCAACACGC AGAGCGGAGG CAGCGAGACT
GTGCGAGGAA CGCAGGTCGG CACGTACAAC TATGTCAGCA ATAGTCAAGC GGGATCCAGC
AACCTCCTGG ACTACAAGCA GACCAATACC GTCAGCACCG CCTTCAATCA GATCGTCAAC
GACCAGTCGA CCACAGCTGT GTCGAACACC GCTTACGTCG TTCAGGACGG CAATGGTCTG
TACAGCAAGG GCTTGCAGAC TGGCGGGAGC TACAATTCGG CCAATGTCTC GCAAACCGGG
CAGTTCAGCG CCAGCTACTA CACGCAGGAC GGTTCGAGCA ATTCGATCAT TGTCGCTCAG
GTCGGCAATT ACAACGTCTC CAACGTGAGC CAGATCGGCG CAGGCAACCA CGCCAACATC
CAGCAGAAGC CGTAG
 
Protein sequence
MKRNLFFVTA SVLALSSSAA FAADSNTVYL NQSGDNQKAD VSQSGNGNSV GAFNGNSGFT 
QENGTLSGAN ILTVTQSGNS NSVGRDIQGK QSGAGNSAAI VQEGASSDVE LQQTGTSNGA
VPSGWNWTND PGVFNKITQD SSSNGSKVSV IQDGKNNVFS IKQGNTGNST SVNQIGEWGM
AYVRQGIGAA ETDASTGNAL PTGGNYNVAS ITQNSAGLNY AVAVQGGGNS NSLSISQSGN
LQGANAWQNG NANVFSSIQT NVGNVVGLTG GIYGTDSPIT QTGDNNTYIN TQTGSSNSAN
GSQTGNFNQV FNTQSGGSET VRGTQVGTYN YVSNSQAGSS NLLDYKQTNT VSTAFNQIVN
DQSTTAVSNT AYVVQDGNGL YSKGLQTGGS YNSANVSQTG QFSASYYTQD GSSNSIIVAQ
VGNYNVSNVS QIGAGNHANI QQKP