| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1269 |
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| Symbol | |
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| ID | 6408925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1342869 |
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| End bp | 1344155 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711167 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001990284 |
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| Protein GI | 192289679 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAT CTTCGAGCAC GGTCGCGCCG ATCACGGACA CCAGCCTGAC CGGCTTCTAC
AAAGACATGA CCGTCACTGA GAAGCGCACG TTCTGGGCCT GTGCCACAGG CTGGGCGCTC
GACGGCATGG ACTTCATGAT CTACCCGCTG GTGATCGGCA CGATCATCGC GCTGTGGAAG
GTCGATGCCG GCTCGGCCGG TCTCGCCGGC ACCGTGACGC TGCTGGCGTC GGCGGTCGGC
GGCTGGGCTG CGGGCTATCT GGCGGACCGG ATCGGGCGCG TCCGCACGCT GCAGCTCACC
ATCATTTGGT TCTCGCTGTT CTCGCTGCTC TGCGCGTTCG CGCAGAACTT CGAACAGCTG
CTGATCCTGC GCGCGCTGCT CGGCTTCGGC TTCGGCGGCG AATGGGCGGC CGGCGCGGTG
CTGATCGGTG AGACGATTCG CCCGCAATAT CGCGGCCGCG CGGTCGGCTC GGTGCAGTCG
GGCTGGGCGG TCGGCTGGGG CATGGCGGTT CTGGCGCAGG CCGCGCTGTT CTCGCTGCTG
CCGCCCGAGG AGGCGTGGCG CTGGATGTTC GCGATCGGCG CGCTGCCGGC GCTGCTGGTG
CTGTATCTGC GCGCCTATGT GAAGGAGCCG CAGGTTGCCG TCGAAGCCCG CGCCAAAGTC
AGTGCGGCGG GTGGCAGCCG CTCGATCCTG GCGATCTTCC AGGGCCGGAT CCTCAAGACC
ACTATCCTGG CCTCGCTGGT CGCCACCGGT TGTCAGGGCG GTTACTACGC GATCACCTTC
TGGGTGCCGC GCTTCCTGAC CACCGAACGC AAGCTCTCGA TCGTCGGCTC GACCGGCTAT
CTGGCGACGC TGATCGTCGG CTCGTTCGTC GGCTATCTGG TCGGTGCGTG GTTCGCCGAT
CGGTTTGGCC GTCGCAGCCT GTTCCTGACG TTCTCGCTCG GCGCCATGGT GGTGGTGCTC
GCCTACACGC AGCTGCCGCT CTCCAACGAA ATGCTCTGGG TGCTCGGCTT CCCGCTCGGC
TTCTTTGCCT CGGGTTACTT CTCGGGCATG GGCGCGTTCC TGACCGAGCT GTTTCCGACC
AGCCTGCGCG GCTCGGGGCA GGGCTTCTGC TACAATTTTG GCCGTGGCGT TGGCGCGCTG
TTTCCGTTCC TGGTCGGCTA TCTGTCACAG GTTACCACGC TCGCCAACGC GATCTGCCTG
TTCGCGGTGT TCGCTTACGT GCTGTTCTTC GCTGCCGCCT ATGCGCTGCC GGAGACTCGC
GGCAGGGTGC TGAGCGCCGA TGAGTAA
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| Protein sequence | MTTSSSTVAP ITDTSLTGFY KDMTVTEKRT FWACATGWAL DGMDFMIYPL VIGTIIALWK
VDAGSAGLAG TVTLLASAVG GWAAGYLADR IGRVRTLQLT IIWFSLFSLL CAFAQNFEQL
LILRALLGFG FGGEWAAGAV LIGETIRPQY RGRAVGSVQS GWAVGWGMAV LAQAALFSLL
PPEEAWRWMF AIGALPALLV LYLRAYVKEP QVAVEARAKV SAAGGSRSIL AIFQGRILKT
TILASLVATG CQGGYYAITF WVPRFLTTER KLSIVGSTGY LATLIVGSFV GYLVGAWFAD
RFGRRSLFLT FSLGAMVVVL AYTQLPLSNE MLWVLGFPLG FFASGYFSGM GAFLTELFPT
SLRGSGQGFC YNFGRGVGAL FPFLVGYLSQ VTTLANAICL FAVFAYVLFF AAAYALPETR
GRVLSADE
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