| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1248 |
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| Symbol | |
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| ID | 6408904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1325221 |
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| End bp | 1326207 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711146 |
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| Product | quinone oxidoreductase, YhdH/YhfP family |
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| Protein accession | YP_001990263 |
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| Protein GI | 192289658 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.893092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGT TCAAGGCGAT CCGGATCGAC AAGGCCGAGA AGGGCACTGT CGCGGCGCTC
ACCCAGTTCG ACGAGGCCGA GCTGATGGAC GGCGACGTGA CTGTCGCGGT GGAGTGGTCG
ACCCTCAACT ACAAAGACGG TCTCGCGGTC ACCGGCAAGG CGCCGGTGGT CCGCCGCTTT
CCGATGATCG CCGGCATCGA TTTCGCCGGC ACCGTGCTGG AGTCTTCGCA TCCCGATTGG
AAGGCCGGCG ACAAGGTGGT GTGCAACGGC TGGGGCATGG GCGAGACCCA TCTCGGCGCC
TATGCGGAGA AGGCCCGCGT CAAGGGCGAC TGGTTGGTGC GCTTGCCGCA GTCGCTGAGT
GCGCGCGACG CGATGGCGAT CGGCACCGCC GGCTACACCG CGATGCTCAG CGTGCTGGCG
CTGGAGAAGC ACGGGCTGAC CCCGAAGGAC GGCCCGGTGG TCGTCGCCGG CGCGGCTGGC
GGCGTCGGTT CGGTAGCGAT CGCGCTGTTG TCGAAGCTCG GCTATCACGT CATCGCATCG
ACCGGCCGGG CGTCCGAAGA GGCTTACTTG CGACAGCTCG GTGCCGCCGA GATCATCGAT
CGTAACGAGT TGTCCGGTCC GGCCAAGCCG CTGGCGAAGG AGCGCTGGGC CGGCGGCATC
GACAGCGTCG GCTCGACCAC GCTGGCCAAT CTGCTGTCGA TGACCAAGTA CCGCGGCGCT
ATCGCCGCCT GCGGTCTGGC GGCCGGCATG GACCTGCCGA GCTCGGTCGC CCCGTTCATT
TTGCGCGGAG TGTGTCTTTA CGGCATCGAC TCGGTGATGT GCCCGTTGTC GGAGCGCAAG
CGCGCCTGGG AGCGACTCGC ATCCGATCTC GATCCGGCAA AACTTGCGGA AATCACGCAA
GAAATCGGCC TCGACCAGGT CATCGACGCC GGCGCCAAGG TGCTGGCTGG TCAGGTCCGC
GGCCGCATCG TGGTGAAAAT TTCGTAG
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| Protein sequence | MATFKAIRID KAEKGTVAAL TQFDEAELMD GDVTVAVEWS TLNYKDGLAV TGKAPVVRRF
PMIAGIDFAG TVLESSHPDW KAGDKVVCNG WGMGETHLGA YAEKARVKGD WLVRLPQSLS
ARDAMAIGTA GYTAMLSVLA LEKHGLTPKD GPVVVAGAAG GVGSVAIALL SKLGYHVIAS
TGRASEEAYL RQLGAAEIID RNELSGPAKP LAKERWAGGI DSVGSTTLAN LLSMTKYRGA
IAACGLAAGM DLPSSVAPFI LRGVCLYGID SVMCPLSERK RAWERLASDL DPAKLAEITQ
EIGLDQVIDA GAKVLAGQVR GRIVVKIS
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