Gene Rpal_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1245 
Symbol 
ID6408901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1321153 
End bp1322028 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID642711143 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_001990260 
Protein GI192289655 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.651391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCGT CTGCCCTGCT GCATCCCGAT GCATTCCTGT CGCCATTGGC GATCACCGAC 
GCTGTGCGGC GCGCGCTCGA CGAGGATCTC GGCCGTGCCG GCGACGTCAC CTCGGTCGCA
ACGATTCCGG AAGCAACCCA AGCGCACGCG ATCCTGGTGG CGCGCCAGGC CGGCGTGATC
GCAGGATTGC CGCTGGCGAT CGAGACGTTT CGCCAGCTCT CGACGGACGT CGCCATCACC
GCGCATGCGC GCGACGGCGA CACTGTGGCG GCGGGCATTC AGGTGCTGAC GATCTCGGGC
CCGGCCCGCG CCGTGCTCAC CGGCGAGCGT ACCGCGCTGA ACTTCGTCGG CCGGCTGTCG
GGCATTGCGA CGCTGACCGC GGACTACGTC CGCCACACCG CAGGCACCAA GATGCGGATC
TGCTGCACCC GCAAGACCAC GCCGGGGCTG CGCGCGCTGG AGAAATACGC GGTGCGCTGC
GGCGGCGGCT TCAACCACCG CTTCGGCCTC GACGACGCCA TCCTGATCAA GGACAACCAC
ATCGCGGTGG CCGGCGGCAT CCGACCGGTG CTGGAAGCGG CGCGCGCCAA GATCGGCCAT
CTGGTCAAGA TCGAGATCGA GGTCGACACG CTCGATCAGC TGCGCGAGGT GCTCGACACC
AATCTTGCCG ACGTCGTGCT GCTCGACAAC ATGGATCTCG ACACGCTGAA GAAAGCGGTG
GCGATGAGCG CCGGCCGCGT CGTGCTCGAA GCTTCCGGCG GCGTCACCCG CGAGTCGATC
AGCAGCATCG CCGCAACCGG CGTCGACTAC GCCTCCTCCG GCGCGCTCAC ACACTCGGCG
CCGAATTTCG ACGTCGCGCT GGATATCGAT GCGTAG
 
Protein sequence
MLPSALLHPD AFLSPLAITD AVRRALDEDL GRAGDVTSVA TIPEATQAHA ILVARQAGVI 
AGLPLAIETF RQLSTDVAIT AHARDGDTVA AGIQVLTISG PARAVLTGER TALNFVGRLS
GIATLTADYV RHTAGTKMRI CCTRKTTPGL RALEKYAVRC GGGFNHRFGL DDAILIKDNH
IAVAGGIRPV LEAARAKIGH LVKIEIEVDT LDQLREVLDT NLADVVLLDN MDLDTLKKAV
AMSAGRVVLE ASGGVTRESI SSIAATGVDY ASSGALTHSA PNFDVALDID A