| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1241 |
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| Symbol | |
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| ID | 6408897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1313814 |
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| End bp | 1315100 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711139 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001990256 |
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| Protein GI | 192289651 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3174] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATGA TCGCAACACC GTCCGTTCAC AGCCTCGCAC TGTTGTTGCT GCTGAGTTTC
TTTCTCGGTT TCGCGTTCGA AGATTTCTTC GAACAGCGCA AATCGGCGCG GCCGGGCGGC
GTCCGCACTT TTCCACTGCT ATCTCTCGGC GGCGGCGTTT TGTACTGGCT CGACCCGACC
CATCTGGTCG CCTTCACCGG CGGATTGCTG GTGCTCGGCG TCTGGCTGTC GATCTTCTAC
ACCGTGCATT TGCGCGAGCG CGACGACCAG GGCGAGCGCA ATGCCGGCCT CGTCGTGCTG
CTGCTCAACG TTCACGCATA TCTGCTCGGG GCGATCGCGC TGGCGCTGCC GCATTGGGTT
GCGGTGGGCG TGACGGTGAC CGCAGTGATG CTGCTGACGG GCCGCGACTG GCTGCACCGG
CTGGTGCGCA AGGTCGATAC GCGCGAGATC ACCACAGCGG CGCAGTTTTT GATCCTCAGC
GGTGTGGTGC TGCCGCTGCT GCCGGCCGAG CCGGTGACCC CGCTGACCAG CATCACGCCG
CGGCAGGTGT GGCTGGCGCT GACGCTGGTG TCGGCGCTGT CCTATGCGAG CTATCTGGCG
CAGCGTTATT GGCAGCGCGC CGCCCAAGGG CTGTGGATGG CCGGACTCGG CGGGCTGTAT
TCCTCGACCG CCACCACCGT CGTTCTGGCG CGGCAAGCCG CCGTCAGCGA GTCGTTCCGT
CGCCAGGCGA CGGCTGGAAT CACCCTCGCG ACCGGCATCA TGTACCTGCG CATCCTGGTG
GTGATCGCGG TGTTCAACCT GACGCTGGCG CGCGCATTGG CGGCGCCGAT GCTGGGGCTC
GCGGCAGTCG CTCTGGCGAT CGCAGCGCTG CAATACCTCA TCATCAAAGC GCCCAGCGGC
GAGGCCACCC AGCCATCGGA ACGTGGCAAC CCGCTCGAAC TCGGCGCCGC AGCGGTGTTT
GCAGCCCTGT TCGTCGCGAT CTCGCTGGCC TCGACCTGGG TCAAAACCGA ATTCGGTACA
CAGGGCATCT ACTGGCTGGC GGCGATCGTC GGCTTTTCCG ACATCGACCC GTTCGTGCTC
AACTTGGCGC AAGGCGGCAC CGCGGGTATC GGTGAACATG CGGTCGCGAT CGCGGTGTTG
ATCGCTGCCT CGTCCAACAA CGTACTGAAG GCTGCCTATG CGGTAGCATT CGGAGGCCGC
CGGACCTGGC CGAGCGCGGT GGTGCTGGTG GGGCTGGCGA TCGCCGGCGT CGCGCTGGCG
GCGTGGCTCG CGAAGATCGG GGCGTGA
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| Protein sequence | MPMIATPSVH SLALLLLLSF FLGFAFEDFF EQRKSARPGG VRTFPLLSLG GGVLYWLDPT
HLVAFTGGLL VLGVWLSIFY TVHLRERDDQ GERNAGLVVL LLNVHAYLLG AIALALPHWV
AVGVTVTAVM LLTGRDWLHR LVRKVDTREI TTAAQFLILS GVVLPLLPAE PVTPLTSITP
RQVWLALTLV SALSYASYLA QRYWQRAAQG LWMAGLGGLY SSTATTVVLA RQAAVSESFR
RQATAGITLA TGIMYLRILV VIAVFNLTLA RALAAPMLGL AAVALAIAAL QYLIIKAPSG
EATQPSERGN PLELGAAAVF AALFVAISLA STWVKTEFGT QGIYWLAAIV GFSDIDPFVL
NLAQGGTAGI GEHAVAIAVL IAASSNNVLK AAYAVAFGGR RTWPSAVVLV GLAIAGVALA
AWLAKIGA
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