| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1235 |
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| Symbol | |
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| ID | 6408891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1306861 |
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| End bp | 1307763 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711133 |
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| Product | peptidase S49 |
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| Protein accession | YP_001990250 |
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| Protein GI | 192289645 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG CTGCGATCAG CGGTCGCAGC GAGCAGGGCT GGCTCGCCGG TCTCGGCAAC
TGGATTCCGG CGCGTTTCCG ACGCGACATT CCGGTGGTGC CGGTGGTGCG GCTGTCGGGC
ACGATCGGTG CGGTAACCCC GCTGCGGCCG GGCCTGACGC TTGCCGGAGT CGCCAAGCTG
CTCGACCGCG CCTTCTCCAC CCGCAATGCC AAGGCAGTGG CGCTGGCGAT CAATTCGCCG
GGCGGCTCGC CGGTGCAGTC GCGGCTGATC TATCTGCGCA TCCGAGCGCT CGCCGCCGAG
AAGAAGCTGC CAGTGTACGC GTTCGTCGAG GATGTCGCGG CATCCGGCGG CTACATGATC
GCCTGTGCGG CCGATGAGAT CTATTGCGAC CCGTCGTCGA TTCTCGGTTC GATCGGCGTC
GTCGGCGGTG GCTTCGGCTT TCAGGAACTG ATCAGGAAAA TCGGCGTCGA ACGCCGGCTC
TACACCGCCG GCGAGCGCAA GGCGCAGCTC GATCCGTTCC TGCCCGAAGA CCCGCAGGAA
GTCGCGCGGC TGAAGGTGCT GCAGCAGGAG ATCCACGCGC TGTTCATCGC GCTGGTGAAG
GAGAGCCGCG GCACCCGCCT GAAGGGCGAG GAGTCGAAAC TGTTCACCGG CGAGTACTGG
GCCGGCGCCA CCTCGGTGTC GCTCGGGCTT GCTGATTCGA TCGGTGATTT GCGCGCGGTG
CTGCGCGGCA AGTTCGGCGA CAAGGTCCGC ACCCCGCTGA TCTCACCGCC GACCGGTCTG
CTCGCCAACC TGTCGCGCAA ATCGAGCGGT GCGGGAGCTT CGCTCGACGG CGTCGCTGCA
CTCCCCGAAT CAATGATTAC GGCGCTGGAA ACGCGGGCGA TCTGGGCCAA ATACGGCTTT
TGA
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| Protein sequence | MSDAAISGRS EQGWLAGLGN WIPARFRRDI PVVPVVRLSG TIGAVTPLRP GLTLAGVAKL
LDRAFSTRNA KAVALAINSP GGSPVQSRLI YLRIRALAAE KKLPVYAFVE DVAASGGYMI
ACAADEIYCD PSSILGSIGV VGGGFGFQEL IRKIGVERRL YTAGERKAQL DPFLPEDPQE
VARLKVLQQE IHALFIALVK ESRGTRLKGE ESKLFTGEYW AGATSVSLGL ADSIGDLRAV
LRGKFGDKVR TPLISPPTGL LANLSRKSSG AGASLDGVAA LPESMITALE TRAIWAKYGF
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