| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1232 |
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| Symbol | |
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| ID | 6408888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1304398 |
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| End bp | 1305408 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711130 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_001990247 |
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| Protein GI | 192289642 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGTTA TCGTACCCTT CGAGGGCCCC TCGACCGCCT CGATCGACCA ACTGGTCGAA
CTCGTTGCGG CGGACATGGA GCGCGTCAAC GCCACCATCC TGTCGCGGAC CGGCTCCGAC
GTCACCATGA TTCCGGAAGT CGCCAACCAT CTGATCTCTT CCGGCGGCAA GCGGCTGCGG
CCGATGCTGA CTTTGGCGAT GGCGAATCTC ACCGGTTACA CCGGCGACGG CCACATCAAG
CTCGCTGCCG CAGTCGAATT CATGCACACC GCGACGCTGC TGCACGACGA CGTCGTCGAC
GAGAGCGAGA TGCGCCGCGG CAAGAAGTCG GCGCGGATGC TGTGGGGTAA CGAGGCCAGC
GTGCTGGTCG GCGACTTCCT GCTCGGCCAG GCGTTCCGGA TGATGGTCGA GGTCGGCTCG
CTGCGCGCAC TCGACATCCT GTCGTCGGCG TCCGCCACCA TCGCCGAAGG CGAGGTGATG
CAGCTTGCCG CCGCCAAGAA CACCGCAACC ACCGAAGACG AATATCTCGC GGTGATCCGC
GGCAAGACCG CCGAACTGTT CGCCGCCGCC TGCGAAGTCG GCCCGGCGAT TGCCAACCGG
CCGAAGCCGG AGCAGTCGGC CTGCCGCTCG TTCGGCATGA ACATCGGCAT CGCCTTCCAG
CTGATCGACG ACGTGCTCGA CTACGGCGGC AAGGCCGCCA AGCTCGGCAA GAACGTCGGC
GACGACTTCC GTGAGGGCAA GATCACCCTG CCGGTTGTGC TGGCGTTCCG CCGCGGCAAC
GACGCCGAGC GCGAGTTCTG GATCAAGTCG CTGGAGCGCG GCGAGATTTC GGATGCCGAC
CTCGATCAGG CGATCAAGCT GATGACCAAG CACCGCGCAC TCGACGACAC CATCCAGCGT
GCCCATCACT ACGGCGCGAT GGCGGTCGAC GCGCTGGCGC TGTTCCCCTC CTCGCCGATG
AAGACGGCGC TGGAGCAGGT GGTCGCGTTC TGCCTCGCCC GCTCACACTG A
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| Protein sequence | MAVIVPFEGP STASIDQLVE LVAADMERVN ATILSRTGSD VTMIPEVANH LISSGGKRLR
PMLTLAMANL TGYTGDGHIK LAAAVEFMHT ATLLHDDVVD ESEMRRGKKS ARMLWGNEAS
VLVGDFLLGQ AFRMMVEVGS LRALDILSSA SATIAEGEVM QLAAAKNTAT TEDEYLAVIR
GKTAELFAAA CEVGPAIANR PKPEQSACRS FGMNIGIAFQ LIDDVLDYGG KAAKLGKNVG
DDFREGKITL PVVLAFRRGN DAEREFWIKS LERGEISDAD LDQAIKLMTK HRALDDTIQR
AHHYGAMAVD ALALFPSSPM KTALEQVVAF CLARSH
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