| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1225 |
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| Symbol | |
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| ID | 6408881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1294774 |
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| End bp | 1295934 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711123 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_001990240 |
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| Protein GI | 192289635 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.931656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAG CATCCAATGC CCTCAAGCGC CCGCCGGTCA CGGCGCCCTC CGAGCCGGTG
GGCGCGTCTT CCCCTTTCCC CGCCATCGAG GTGGCGGTTG ATGAGCAGCG GCGCCGCGGT
CGTGGCGCGC AGTCGAACGC CAGCGGCCGC TACGAGGCTG AGGCGCGCAC CGCCTTCGAC
GACGGATGGG AAAGTCTGGA GGATCTGCCG CCGTTCAAGA CGACGGTGGT GCTGGATACC
GCTCGCAAGG TCATTACCCG CAACGAGTCG CCGGATATCG GCTTTGATCG CTCGATCAAT
CCGTATCGTG GCTGCGAGCA CGGCTGCGTG TACTGCTTCG CCCGGCCGAC CCACGCCTAT
CTCGGTCTGT CGCCGGGGTT GGATTTCGAA TCCCGGCTGT TCGCCAAGCC GGACGCGCCC
GCGCTGCTTG AAAAGGAGCT GGCGGCACCT GAATACGAGC CGCGGATGAT CGCGATCGGC
ACCAATACCG ATCCGTATCA GCCGATCGAA CGCGAACGGA AGATCATGCG CGGCATCCTG
GAGGTGCTGG AGAAGAGCGG TCACCCGGTC GGCATCGTCA CCAAGTCCGC ACTGGTGGTG
CGCGACATCG ACATCCTGGC GCGCATGGCC AAGCGGCAGC TCGCCAAGGT GGCGCTGTCG
GTCACGTCGC TCGATCCGAA GCTGGCGCGC AGCATGGAGC CGCGCGCTTC GACGCCGGCC
AAGCGGCTCG AAGCGCTGAA GCTGCTGGCC GACGCCGGCA TTCCCACCAC TGTGATGGTG
GCACCGGTGA TTCCGGCGCT CAACGACATG GAGATCGAGC GCATCCTCGA TGCCGCCGCC
CATGCCGGCG TCAAGGAAGC GAGCTACGTG CTGCTGCGGC TGCCGCTGGA AGTGCGGGAC
CTGTTCCGTG AATGGCTGAT GGCGAACTAT CCGGACCGCT ATCGCCACGT CTTCACGCTG
ATCCGCGACA TGCGCGGCGG CCGGGACTAC GATTCTCAGT GGGGTACCCG GATGAAGGGC
ACCGGCCCGA TCGCCTGGAT GATCGGCCGC AGGTTCGAGA CCGCCTGCAC GAGGCTCGGG
CTGAACAAGC GCCGCTCCAA GTTGACGCTC GACCATTTCG AGAAGCCGGA GAAAGCCGGG
CAGCAGCTCA GCTTGTTCTA A
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| Protein sequence | MSRASNALKR PPVTAPSEPV GASSPFPAIE VAVDEQRRRG RGAQSNASGR YEAEARTAFD
DGWESLEDLP PFKTTVVLDT ARKVITRNES PDIGFDRSIN PYRGCEHGCV YCFARPTHAY
LGLSPGLDFE SRLFAKPDAP ALLEKELAAP EYEPRMIAIG TNTDPYQPIE RERKIMRGIL
EVLEKSGHPV GIVTKSALVV RDIDILARMA KRQLAKVALS VTSLDPKLAR SMEPRASTPA
KRLEALKLLA DAGIPTTVMV APVIPALNDM EIERILDAAA HAGVKEASYV LLRLPLEVRD
LFREWLMANY PDRYRHVFTL IRDMRGGRDY DSQWGTRMKG TGPIAWMIGR RFETACTRLG
LNKRRSKLTL DHFEKPEKAG QQLSLF
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