| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1074 |
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| Symbol | |
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| ID | 6408730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1139704 |
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| End bp | 1140531 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710983 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001990100 |
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| Protein GI | 192289495 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATGGA CCAAGATCAC TCGAGCGCAG TATCGGCGCG ACGGGCTGCG CTACGCAAGC
GACCTGACGG ATGCGGAGTG GGCGTTGATC GCCCGGCGAA TGCCGCCGCG ACAACGTTTG
GGACGGCCTC GCAGGGTCGA TCTGCGGCGC GTGGTTGAAG CGATCCTGTT CATCGCTTCC
ACCGGCTGTC AGTGGCGCGC GCTGCCGAAG GAGTTCCCGC CCTATTCGAC GGTACAAGGC
TATTTCTATA GCTGGCGCGA TAGCGGGCGT TGGCAAAGGA TCTTCGCCGC GCTGGTTCGC
CGCGCGCGAC GACAACTCGG CCACAAGCCG ACGCCGACTG CGGCGGTGAT CGACAGCCAG
AGCGTGCCGA CCACCCAAGC CGGCGGTCCG CGCGGATACG ACGCCGGCAA GCGCGTCTGC
GGGCGCAAAC GCCACATCGT CGTCGACACC AACGGCCTGT TGCTCGCTGT GCACGTTCAC
CCTGCCAACG TGCAGGACGG TCATGGTGCC GTGGCGCTGC TCACGGCCAT GCGCCGTTGT
TTCCCGCGAT TGCGCCATGT CTTTGCCGAT CGTATTTATC ACGGCAATCA GCTTCTCACC
GCGCTGGCGC CCTGCGGGCC GTGGACCATC GAAATCGTCG AGCGGCCCGC CGGCGTCAAA
GGCTTTCAGC TGTTGCCGCG GCGCTGGGTA GTCGAACGCA GCTTCGCCTG GCTCGGCCGA
TGTCGCCGCC TCGCCAAGGA CTTCGAAGCT TCCGCCGCAA CCGAATGCGC CTGGCTGCAC
GTCGCCCATC TTCGACTGCT TCTCAGACGC CTCGCAAAAC CCACATGA
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| Protein sequence | MPWTKITRAQ YRRDGLRYAS DLTDAEWALI ARRMPPRQRL GRPRRVDLRR VVEAILFIAS
TGCQWRALPK EFPPYSTVQG YFYSWRDSGR WQRIFAALVR RARRQLGHKP TPTAAVIDSQ
SVPTTQAGGP RGYDAGKRVC GRKRHIVVDT NGLLLAVHVH PANVQDGHGA VALLTAMRRC
FPRLRHVFAD RIYHGNQLLT ALAPCGPWTI EIVERPAGVK GFQLLPRRWV VERSFAWLGR
CRRLAKDFEA SAATECAWLH VAHLRLLLRR LAKPT
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