| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1053 |
|---|
| Symbol | |
|---|
| ID | 6408709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1122719 |
|---|
| End bp | 1123417 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642710966 |
|---|
| Product | F0F1 ATP synthase subunit A |
|---|
| Protein accession | YP_001990083 |
|---|
| Protein GI | 192289478 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCAC CGCTCAGCAG CATCGCGCTG TTCAATTTGG GGCCGATACC GATCAGCGCT
GGCGTGGTGG TCACCTGGGC GATCATGGTG GCGCTGGTTC TGGGGAGCAT TCTGGTCACG
CGCCGCCCCT GGCTCGTGCC GTCGGCAGCC CAGGCGGCCT TCGAGCTGAT CGTCGATACC
GTGGACGGCC AGATCCGCGA TACCATGCAG ATCGAACCCG CTCCTTATCG CGCCTTCATC
GGCACCCTGT TCGTCTTCAT TTTCGTAGCC AACTGGTCCT CGCTGGTGCC CGGCGTCGCC
CCCCCGACGG CTCAGCTCGA GACCGATGCC GCGCTCGCTG TTCTGGTGTT CTTGGCGGTG
ATCTGGTTCG GCATACGCGT CGGCGGCGTG CGGGGCTATC TGTCGACCTT CGCCTCGCCC
AACCCGATCA TGATCCCGCT CAATTTCATC GAAAGTCTGA CCCGGACCTT CTCGCTGCTG
GTGCGGCTGT TCGGCAATGT GATGAGCGGC GTATTCGTGA TCGGGATCGT ATTGTCGCTC
GCGGGCCTTC TCGTGCCGAT CCCGCTGATG GCGCTCGATC TACTGACCGG TGCGGTGCAA
GCCTACATTT TCTCGGTTCT GGCGATGGTG TTCATTGCCG GTGCGGTGAA CGAAGGACGA
CCGGACAGCA ACAACTCCAG CCAAAGGATG CCCTCATGA
|
|---|
| Protein sequence | MTSPLSSIAL FNLGPIPISA GVVVTWAIMV ALVLGSILVT RRPWLVPSAA QAAFELIVDT
VDGQIRDTMQ IEPAPYRAFI GTLFVFIFVA NWSSLVPGVA PPTAQLETDA ALAVLVFLAV
IWFGIRVGGV RGYLSTFASP NPIMIPLNFI ESLTRTFSLL VRLFGNVMSG VFVIGIVLSL
AGLLVPIPLM ALDLLTGAVQ AYIFSVLAMV FIAGAVNEGR PDSNNSSQRM PS
|
|---|
| |