Gene Rpal_0970 details

Gene Information

• Locus tag: Rpal_0970
• ID: 6408624
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 1037463
• End bp: 1038215
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642710884
• Product: protein of unknown function DUF81
• Protein accession: YP_001990003
• Protein GI: 192289398

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0270305
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCGATC CGTTTCTCCT GATCATCGCT GCGGTCTTCG CGTTCGCCGG ATTCATCAAA 
GGCGTCATCG GCCTTGGCTT GCCGACGGTG TCGATCGGAT TGCTCGCCAT CGCGATGCCG 
CCGGCTCAGG CGGTTGCCAT CGTAATCGTG CCGGCGATCG TCACCAACAT CTGGCAGACC 
TTCGTCGGCA GCTATCTGCG CGACATCCTA CGCCGGCTGT GGCCGCTGCT GCTGGGCACC 
GTGATCGGCA TTCGTCTCGG CGCCGGGCTG ATGACCGGCC CCTATGCCCG CTACGGTTCG 
CTGGTGCTCG GCGTGCTGCT GGTGGCCTAT GGCATTCTCG GCCTCAGCAA ACGCAGCTTC 
CACCTCGCGC CGAGCCGCGA GAAATGGATC GGCGGGCCGG TCGGGCTGAT CACCGGGGTG 
ATCTCGGCGG CGACCGGCGT GCAGGTGATT CCCTCGATGC CTTATCTGCA GGCGATCGGG 
ATGGAGAAGG ACGAGCTGGT GCAGGCGCTC GGCGTGTTCT TCACCACGGC GACGCTGGCG 
CTGGCCGTCA ACCTCACCGA CGCCGGCCTG CTGTCGACCG CAACCGCGCT GCCCGGGCTG 
ATCGCGCTGG TGGCCGCGTT CGCCGGCATG TTCGGCGGCC AGGCGGTGCG CACCCGGATG 
CATCCCGAGA CGTTCCGGCG CTGGTTCCTG ATCGCCCTGA TCGGGCTCGG CCTGTATCTG 
GCCGCCACCA CTCTGGTGAA GCTGTTCGGC TAA 

 

Protein sequence

MFDPFLLIIA AVFAFAGFIK GVIGLGLPTV SIGLLAIAMP PAQAVAIVIV PAIVTNIWQT 
FVGSYLRDIL RRLWPLLLGT VIGIRLGAGL MTGPYARYGS LVLGVLLVAY GILGLSKRSF 
HLAPSREKWI GGPVGLITGV ISAATGVQVI PSMPYLQAIG MEKDELVQAL GVFFTTATLA 
LAVNLTDAGL LSTATALPGL IALVAAFAGM FGGQAVRTRM HPETFRRWFL IALIGLGLYL 
AATTLVKLFG