| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0964 |
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| Symbol | |
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| ID | 6408618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1031140 |
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| End bp | 1031874 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710878 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001989997 |
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| Protein GI | 192289392 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.959016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGATC TCGATTTCAG TGGCCAGCAG GTGCTGGTGG TCGGCGGTTC GAGTGGCATC
GGCAACGGCA TCGCGCAGGC GTTTCGCACC CGCGGCGCCA AGGTCTGCGT CACCGGCACG
CGTCCGGCTC CGTCGGACTA CGCGCCCGAA GACAGCAGCA ATTTCGACGG ACTGAGTTAC
ATGCAGCTCG ACGTCGGCAA GGCGCAGGCG ATCGACGCGT TCGCGCCGCC GATCGAGCGG
CTCGACATCC TGGTGCTGGC GCAGGGCGCG GTGATCTATC GCCGCGGTGA GTTCGAGATG
GACGGCTTTC GCCATGTGAT GGAAGTCAAC CTGATGAGCC TGATGGCCTG CGCGTCGAAA
TTCCACCCGC AGCTCAAAGC GTCGTCCGGC AAGCTGATCA TCGTGTCGTC GACCGCGGCG
TTCCACGCCA CCAAGGGCAA CCCGGCCTAC AACGCGTCGA AGACCGGCGC TTACGGACTG
ACCCGGACGC TGGCGCAGGC GTGGGCCGAG GACGGCATTC GCGTCAACGG CATCGCGCCG
GGGCTGGTCG ATACCAAGAT GACCAAGGTC ACCACCGACA ATCCGAAGCG GCTCGCAGGT
GCGATCGAAG GCATTCCGAT GAAGCGCCTC GGCACGCCGG AAGACATGGC CGGCGCCGCG
CTGTTCCTGG CGTCGCCGCT GTCGGCCTAT GTGCTCGGCC AGACGCTGGT GGTCGACGGC
GGGCTGATTT TGTAA
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| Protein sequence | MNDLDFSGQQ VLVVGGSSGI GNGIAQAFRT RGAKVCVTGT RPAPSDYAPE DSSNFDGLSY
MQLDVGKAQA IDAFAPPIER LDILVLAQGA VIYRRGEFEM DGFRHVMEVN LMSLMACASK
FHPQLKASSG KLIIVSSTAA FHATKGNPAY NASKTGAYGL TRTLAQAWAE DGIRVNGIAP
GLVDTKMTKV TTDNPKRLAG AIEGIPMKRL GTPEDMAGAA LFLASPLSAY VLGQTLVVDG
GLIL
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