| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0959 |
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| Symbol | |
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| ID | 6408613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1020134 |
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| End bp | 1024861 |
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| Gene Length | 4728 bp |
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| Protein Length | 1575 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710873 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_001989992 |
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| Protein GI | 192289387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.434425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGT CTGAGTGCGA GCGCGAAATT ATGGTTGCCA ATGCGCTGAC GGCGGACTCG
GCTGTCAAAA CCACCGCGCG TGAACACACC TGGCGTCCGC CGGCCGAAGG TCTGTACGAC
CTGTCGCGGG AAAAGGACGC CTGCGGCGTC GGCTTCATCG CCAACATCAA GGGCGTCAAG
TCGCATCAGA TCGTCTGTGA CGCGCTGCGT ATCCTGTGCA ACCTCGAGCA CCGCGGTGCC
GTCGGTGCCG ATCCGCGCGC CGGCGACGGC GCCGGCATTC TGGTGCAAAT CCCGCACGCC
TTCTTCAGCC GCAAGGCCAC CGAACTCGGC TTCTCACTGC CGGCGCCGGG CGAATACGCG
GTCGGCGCGC TGTTCATGCC GCGCGAGACT TCGTGGCGGA AGGTGATCAA GAGCATCATC
GAGGATCGCA TCAAGGCCGA AGGCCTGACC TTCCTCGGCT GGCGCGACGT GCCGACCGAC
AACTCTTCGC TCGGCGAGAC CGTGAAGCCG ACCGAGCCTG CCAATATGCA GGTGTTCATC
GGCCGCGGCA CCGCGATCAC TTCGGAAGAC GATTTCGAGC GCAAGCTCTA CATCCTGCGC
AAGTCGATCT CGAACGCGAT CTATCAGCGT CGCGAGCGCG CGCTTGCTGG TTACTATCCG
GTGTCGCTGT CGTGCCGCAC CGTGATCTAC AAGGGTATGT TCCTGGCCGA CCAGCTCGGC
AAGTACTATC CGGACCTGCA CGAGGACGAC TTCGCCAGCG CGCTGGCGCT GGTGCATCAG
CGGTTCTCGA CCAACACCTT CCCGACCTGG TCGCTGGCGC ATCCGTACCG CATGGTCGCG
CACAACGGCG AAATCAACAC CCTGCGCGGC AACGTCAACT GGATGGCGGC GCGTCAGGCG
TCGGTGCATT CGGAGCTGTA CGGCGAAGAC ATCAGCCGGC TGTGGCCGAT CTCCTATGAA
GGCCAGAGCG ACACCGCCTG CTTCGACAAC GCGCTCGAAT TCCTGGTGCG CGGCGGCTAC
TCGCTGACGC ACGCGGTGAT GATGATGATT CCGGAAGCGT GGGCCGGCAA CCCGCTGATG
GACGAGAAGC GCCGCGCTTT CTACGAGTAC CACGCCGCTC TGATGGAGCC GTGGGACGGC
CCGGCTGCGC TCGCCTTCAC CGACGGTCGC CAGATCGGTG CCACGCTCGA CCGTAACGGT
CTGCGTCCGG CGCGCTATCT CGTTACCAAG GACGACCGCA TCGTGATGGC GTCCGAAATG
GGCGTGTTGA AGATTCCGGA AGATCAGATC GTCACCAAGT GGCGGCTGCA GCCCGGCAAG
ATGCTGCTGG TCGACCTCGA GCAGGGCCGC CTGATTCCGG ACGAAGAAAT CAAGGCGCAG
CTCGCCGCCA GCCAGCCCTA TGCCGACTGG CTGCATCGCA CCCAGATCGT GCTGGAAGAG
CTGAAGGAAG CGCCGGTCAA GGGCCAGCGC TCTAACCTGC CGCTGCTCGA TCGGCAGCAG
GCGTTCGGCT ACACCCAGGA AGACATCTCG ATCCTGCTGA CGCCGATGGC GTCGACCGGC
GAGGAAGCCA ATGGCTCGAT GGGCAACGAC ACCCCGCTGT CGGCGCTGTC GGATAAGCCG
AAGCTGCTCT ACACGTACTT CAAGCAGAAC TTCGCCCAGG TCACCAACCC GCCGATCGAT
CCGATCCGCG AGGAGCTGGT GATGAGCCTG GTGTCGATCA TCGGTCCGCG TCCGAACCTG
TTCGATACCG AAGGGCTCGC CGGCACCAAG CGCCTGGAAG TGCGTCAGCC GATCCTGACC
GACGGCGACC TCGAGAAGAT CCGTTCGATC TCTGAAGTTG GCGACTCGCA TTTCAAGTCG
CGCACGCTCG ACACCACCTT CCACGCCGGG CTGGGCGCGT CGGGCATGGA GCAGGTGCTC
GACGAGCTCA ACGGTCGCGC TGAATCCGCG GTGCGTGACG GCGTCAACAT CATCATCCTG
AGCGACCGCG CCGCCGGTTC CGACCGGATT CCGATCCCGG CGCTGTTGGC TTGCGCCTCG
GTGCATCATC ACCTGATCCG CGTCGGCCTG CGGACCTCGG TCGGTCTGGT GATCGAGTCC
GGCGAGCCGC GCGAAGTGCA TCACTTCGCC TGCCTGGCCG GTTTCGGCGC CGAAGCCATC
AACCCGTATC TGGCGTTCGA GACCATCATC GCGCTGAAGG ACCGGCTGCC GACCAAGCTC
GACGACAAGG AAATCGTCAA GCGCTACATC AAGTCGATCG GCAAGGGCCT GCTCAAGGTC
ATGTCGAAGA TGGGCATCTC GACCTATCAG TCGTATTGTG GCGCGCAGAT CTTCGACGCC
GTCGGTCTGC GTCACGACTT CATCGCCAAG TACTTCGCCG GCACCCACTC GCAGATCGAA
GGCGTCGGCC TCGCCGAAAT CGCCGAAGAG ACCGTGCGCC GGCATCGCGA CGCGTTCGGC
ACCGCGCTGG TGTACAAGAC TGCGCTCGAC GTCGGCGGCG AATACGCCTA CCGCACCCGC
GGCGAAGATC ACGCCTGGAC CGCGGACTCG GTCGCGACCT TGCAGCATGC GGTGCGTGGC
AATTCGCAGG AGCGCTATCG CGCGTTCGCC AAGCTGCTCA ACGAGCAGCA GGAGCGGCTG
CTGACGCTGC GTGGCCTGTT CAAGATCAAG GGCGCCGAGG CCGAAGGCCG CAAGCCGGTG
CCGCTCGCCG AAGTCGAGCC AGCGGCCGAG ATCGTCAAGC GGTTCGCGAC CGGCGCGATG
AGCTTCGGAT CGATCTCGCG CGAGGCGCAT ACCACGCTGG CGATCGCTAT GAACCGGATC
GGCGGCAAGT CGAACACCGG TGAGGGCGGC GAGGAGCCGG ATCGCTTCAA GCCAATGGCG
AACGGCGACT CGATGCGCTC GGCGATCAAG CAGGTCGCCT CGGGCCGGTT CGGCGTCACG
ACGGAATACC TCGCCAATTC CGACATGATC CAAATTAAGA TGGCGCAGGG TGCCAAGCCC
GGCGAAGGCG GTCAGTTGCC CGGCCACAAG GTCGACGCCA CGATCGCCGC GGTGCGCCAC
TCGACCCCCG GCGTCGGCCT GATCTCGCCG CCGCCGCACC ACGACATCTA TTCGATCGAA
GATCTGGCGC AGCTGATCTA CGATCTGAAG AACGTCAATC CGTCGAGCGC AATCTCGGTG
AAGCTGGTGT CGGAAATCGG CGTCGGCACC GTCGCGGCGG GCGTCGCCAA GGCGCGCGCC
GACCACGTCA CCATCTCGGG CTTCGAAGGC GGCACCGGCG CTTCGCCGCT GACCTCGATC
AAGCACGCCG GTTCGCCCTG GGAAATCGGC CTCGCCGAAA CCCATCAGAC CCTGGTGCGC
GAGCGGCTGC GGTCGCGTAT CGTCGTCCAG GTCGACGGCG GCTTCCGCAC CGGCCGTGAC
GTCGTGATCG GCGCGCTGCT CGGCGCCGAC GAGTTCGGCT TTGCCACCGC GCCGCTGATC
GCGGCCGGCT GCATCATGAT GCGCAAGTGC CATCTCAACA CCTGCCCGGT CGGCGTCGCG
ACGCAGGACC CGGTGCTGCG CAAGCGCTTC ACCGGCCAGC CCGAGCACGT CATCAACTAC
TTCTTCTTCG TCGCCGAGGA AGTCCGCGAG CTGATGGCGA GCCTCGGCTA TCGCAGCTTC
AACGAGATGG TCGGCCAGTC GCAGATGCTC GATCATGCCG CTCTGGTCGC ACACTGGAAG
GCCAAGGGCC TCGACTTCTC CAAGCTGTTC TTCAAGCAGA AGGCGGACAA GGGCCAGACG
ATCTTCCATT CGGAAGGCCA GGATCATCAT CTCGACAGCG TGCTCGACCG CAAGCTGATC
GCCAAGTCGC AGGCGGCGAT CGACCGCGGC GCGCCGGTGA AGTTCGAGAT CGAGATCAAC
AACACCGACC GCTCGGCCGG CGCGATGCTG TCCGGCACCG TCGCCAAGCA TTACGGCCAC
GCCGGCCTGC CGGCCGACAC CATCCAGGTG CATCTCAAGG GCACCGCGGG TCAGGCGTTC
GGCGCTTGGC TGGCGCGCGG CATCACCTTC GATCTCGAAG GGGAAGGCAA CGACTACGTC
GGCAAGGGCC TGTCGGGCGG CAAGATCATC GTCCGGCCGC CGGCCAATTC GGGCATCGTG
CCGGAGCATT CGATCATCGT CGGCAACACC GTGATGTACG GAGCGATCGA GGGCGAGTGC
TACTTCCGCG GCGTCGCCGG CGAACGCTTC GCGGTGCGTA ACTCGGGCGC GGTCGCGGTG
GTCGAAGGCG CCGGCGATCA TTGCTGCGAA TACATGACCG GCGGCATCGT CGTGGTGCTC
GGCAAGACCG GTCGTAACTT CGCGGCCGGC ATGTCGGGCG GCGTCGCCTA CGTGCTGGAC
GAGGACGGCA GCTTCGCCAA GACCTGCAAC ATGGCGATGG TCGAGCTCGA GCCGGTGCTG
TCGGAAGAGA TGATCAACGC CGGCACGTTC CATCAGTCCG GCGATCTCGA AGCGCATGGC
AAGGTCGACG TGTTCGCCGA TCTGCTCGGC GCCGACGTCG AGCGGCTGCA CGTGCTGATC
TCGCGCCACG CCAAGTACAC CGGCTCCAAG CGCGCCCAGG ACATCCTGGC GAACTGGAAG
AGCTACTTGC CGAAATTCCG CAAGGTGATG CCGGTCGAGT ATCGCCGCGC GCTGCGCGAG
ATGAAAGCTC GCGCCGCCGA GGAGCCGAAG ATCGCGATCG GGGCGTAA
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| Protein sequence | MSGSECEREI MVANALTADS AVKTTAREHT WRPPAEGLYD LSREKDACGV GFIANIKGVK
SHQIVCDALR ILCNLEHRGA VGADPRAGDG AGILVQIPHA FFSRKATELG FSLPAPGEYA
VGALFMPRET SWRKVIKSII EDRIKAEGLT FLGWRDVPTD NSSLGETVKP TEPANMQVFI
GRGTAITSED DFERKLYILR KSISNAIYQR RERALAGYYP VSLSCRTVIY KGMFLADQLG
KYYPDLHEDD FASALALVHQ RFSTNTFPTW SLAHPYRMVA HNGEINTLRG NVNWMAARQA
SVHSELYGED ISRLWPISYE GQSDTACFDN ALEFLVRGGY SLTHAVMMMI PEAWAGNPLM
DEKRRAFYEY HAALMEPWDG PAALAFTDGR QIGATLDRNG LRPARYLVTK DDRIVMASEM
GVLKIPEDQI VTKWRLQPGK MLLVDLEQGR LIPDEEIKAQ LAASQPYADW LHRTQIVLEE
LKEAPVKGQR SNLPLLDRQQ AFGYTQEDIS ILLTPMASTG EEANGSMGND TPLSALSDKP
KLLYTYFKQN FAQVTNPPID PIREELVMSL VSIIGPRPNL FDTEGLAGTK RLEVRQPILT
DGDLEKIRSI SEVGDSHFKS RTLDTTFHAG LGASGMEQVL DELNGRAESA VRDGVNIIIL
SDRAAGSDRI PIPALLACAS VHHHLIRVGL RTSVGLVIES GEPREVHHFA CLAGFGAEAI
NPYLAFETII ALKDRLPTKL DDKEIVKRYI KSIGKGLLKV MSKMGISTYQ SYCGAQIFDA
VGLRHDFIAK YFAGTHSQIE GVGLAEIAEE TVRRHRDAFG TALVYKTALD VGGEYAYRTR
GEDHAWTADS VATLQHAVRG NSQERYRAFA KLLNEQQERL LTLRGLFKIK GAEAEGRKPV
PLAEVEPAAE IVKRFATGAM SFGSISREAH TTLAIAMNRI GGKSNTGEGG EEPDRFKPMA
NGDSMRSAIK QVASGRFGVT TEYLANSDMI QIKMAQGAKP GEGGQLPGHK VDATIAAVRH
STPGVGLISP PPHHDIYSIE DLAQLIYDLK NVNPSSAISV KLVSEIGVGT VAAGVAKARA
DHVTISGFEG GTGASPLTSI KHAGSPWEIG LAETHQTLVR ERLRSRIVVQ VDGGFRTGRD
VVIGALLGAD EFGFATAPLI AAGCIMMRKC HLNTCPVGVA TQDPVLRKRF TGQPEHVINY
FFFVAEEVRE LMASLGYRSF NEMVGQSQML DHAALVAHWK AKGLDFSKLF FKQKADKGQT
IFHSEGQDHH LDSVLDRKLI AKSQAAIDRG APVKFEIEIN NTDRSAGAML SGTVAKHYGH
AGLPADTIQV HLKGTAGQAF GAWLARGITF DLEGEGNDYV GKGLSGGKII VRPPANSGIV
PEHSIIVGNT VMYGAIEGEC YFRGVAGERF AVRNSGAVAV VEGAGDHCCE YMTGGIVVVL
GKTGRNFAAG MSGGVAYVLD EDGSFAKTCN MAMVELEPVL SEEMINAGTF HQSGDLEAHG
KVDVFADLLG ADVERLHVLI SRHAKYTGSK RAQDILANWK SYLPKFRKVM PVEYRRALRE
MKARAAEEPK IAIGA
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