| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0948 |
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| Symbol | |
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| ID | 6408602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1008173 |
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| End bp | 1009888 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710862 |
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| Product | hypothetical protein |
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| Protein accession | YP_001989981 |
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| Protein GI | 192289376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5338] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTGGG CTCCAGCACC GGGCCGCCGC TCTCGCGCCA GCTTGTGCGC CGGATCCGCA
TGTCTGGCGC TCGCTCTGGG CGGCACAACG GGCGCGAGTG CGCAAAGCCT GACCCGCGAT
CTGCTCAACC CGCAGCGCGG CGGCTTCGTC GCCACCCAGG ACCTGCCGCT GCGGCCGACT
CCCGGCACCT CGTCTGCCTC GTCGTCCCGG GTCCGCAACG TTTTCACGCA GCCGGACAGT
GACGAGGCCA ACCCGCCCCT CCGGCCGACC TCGACGGCAG CGTTGCAGCC TCCACCCAGC
AGCGCCAATG CGGACAATGC CGGCGTCGCC TACGACGCGC TGAACCGCAA GCGCCAGCGG
CCGAAATACT ATCCGGGCGC GCCGCGGCCG AAGGCGATCG GGCCCGGATC GCCGATGGTC
ACCCCGGCGC CGCCGCCGGC GCGGCCGCTG CCGCCGTCCC AGGCCGCCGC AAAGCCGCCA
TTGCCGGCTT CGCTCGCCGG CCGCGTGCCT GGGCAACCGA GCCGCCGGCA GCTCAAGCTC
GACGACGATC CGTTCGGTCC GGTCGGCGAT TACGCCGGCA GCTTTCTGAT CAAGGGCGCA
CTCGAAGTCG GCGGTGGTTA CGATTCCAAC CCCGCGCGCA CCAACACCGC CCGCAGCTCC
GGCTTCTACA AGGTGGCGCC GGAGCTGATG ATCACCTCGG ACTGGGAGCG GCATGCGTTG
GTCGCTGATC TGCGCGGCGC GTTCACCGGC TACGGCCACG ATTTCTATCC GCCGGCCGGC
ACGGTGTCGC CGGCGCCGAT CAGCCTCGAC CGGCCGGAAT TCAACGGCCA TATCGACGGC
CGGCTCGATG CCAGCCGCGA CACGCATCTG ATCGGCCAGG GCCGGCTGAT CGTCGGCACC
GACAACCCGG GCAGCCCGAA CATTCAGGCC GGCCTGACCA AATATCCGCT GTTCACCACC
ACCGGTTTCT CCGGCGGCAT CGATCAGAGC TTCAATCGCC TGCAGGTCAC CGCGGTCGGC
AATTTCGATC GCACCGTGTA TCAGGACTCG CAGCTGACCG ACGGCACCAG CTATCCGAAC
AAGGACCGCA ACTACAATCA ATACGGCGGC GTCGGCCGGG TCAGCTACGA GCTGAAGCCG
GGCCTGAAGC CGTTCGTCGA GATCGAAGGT GACACCCGCG TCCACGACGT GCCGGTCGAT
CGCTATCAGT ATCTGCGCGG CTCCGACGGC GGCTACGCCA AGGGCGGCAC CAGCTTCGAA
CTGACGCGGC TGCTGACCGG CGAAGTCTCG ATCGGCTATG CGGCGCGCAC CTATGTGGAT
CCGCGGCTGG AGAAGCTCGG CGGCCTGCTC ACCGCGGCAT CGCTGGTGTG GACGGTGACG
CCGCTGACCA CGGTGAAGTT CAACGCCGAC ACCCAGATCT CGGAATCGCC GCTGGCCGGC
GTCTCGGGCG TGTTCACCCG CACCTATACG GCCGAGGTCG ACCACGACTT CCGCCGTTGG
CTGACGGCGA TCGGCAAGTT CACCTACGCG ACCTACGACT ATCAGGGCTC CGGCCGTTCC
GACCGGCTCA ATTCGGTCGA AGGCAATCTG ATCTACAAGC TCAACCGCTC GGTTTGGGTG
AAGGGCCAGC TTCGCTACGA CAAGCTGGAT TCCAACGTCG TCGGCGGCAG CTACGACGCG
ACCGTGGTGA TGCTCACCGT TCGCCTGCAG AACTGA
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| Protein sequence | MTWAPAPGRR SRASLCAGSA CLALALGGTT GASAQSLTRD LLNPQRGGFV ATQDLPLRPT
PGTSSASSSR VRNVFTQPDS DEANPPLRPT STAALQPPPS SANADNAGVA YDALNRKRQR
PKYYPGAPRP KAIGPGSPMV TPAPPPARPL PPSQAAAKPP LPASLAGRVP GQPSRRQLKL
DDDPFGPVGD YAGSFLIKGA LEVGGGYDSN PARTNTARSS GFYKVAPELM ITSDWERHAL
VADLRGAFTG YGHDFYPPAG TVSPAPISLD RPEFNGHIDG RLDASRDTHL IGQGRLIVGT
DNPGSPNIQA GLTKYPLFTT TGFSGGIDQS FNRLQVTAVG NFDRTVYQDS QLTDGTSYPN
KDRNYNQYGG VGRVSYELKP GLKPFVEIEG DTRVHDVPVD RYQYLRGSDG GYAKGGTSFE
LTRLLTGEVS IGYAARTYVD PRLEKLGGLL TAASLVWTVT PLTTVKFNAD TQISESPLAG
VSGVFTRTYT AEVDHDFRRW LTAIGKFTYA TYDYQGSGRS DRLNSVEGNL IYKLNRSVWV
KGQLRYDKLD SNVVGGSYDA TVVMLTVRLQ N
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