| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0946 |
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| Symbol | |
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| ID | 6408600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1005745 |
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| End bp | 1006605 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710860 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001989979 |
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| Protein GI | 192289374 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.584518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGAA CGAACTACCA GGACCGACTT GACCGAGTGA CGTCGTACAT TCACGACAAT
CTCGATGGCG AGCTCGACTT CGACAGGATC GCTGAAGTCG CGTCGCTGTC GCCATATCAC
TGGCATCGAA TCTATCACGC CTGCCGAGGT GAAACCGCGG TCGCCACCAC ACGCCGTCTG
CGGCTGCAGC GCGCCTCCGT CAGTCTGGCG CAGACCGATG ACCCGATCGC GCAGATCGCG
ACCAAAGCAG GATATGCCAG CCCGGCGGCG TTCACGCGCG CCTTTGCGGA CGCCTATGGG
TTGCCGCCGG CGACCTATCG CGAGCGGGGT AGCCATGCCG ATTTCCGGCC GGGGCAACTC
GCCACTCAGC AAGGTGGCTG GTCGATCGAA ATCCAACGAT TCGATGCCAT TCCCGCGTTC
GCCATCCGCC ACGACGGTCC GTATATCGAG ATCGGCAAGG CCTTCGGAAT GCTGTTCGGT
CAACTCGCCG CTCGCGGCGC CCTGCCGGAG CGGATCGAAA TGATCGCGGT GTATCTCGAC
GATCCGACGG CCGTGCCGCT GGAGCGGTTG CGCTCGTTCG CAGCGCTTGC AGCGCCGGGC
GGCAAAGACC TCGATCCGCC GGTCGAGCGC ATCGAGATCG CCGGGGGCGA CTATGCGGTG
CTTCGGCACA AGGGCCCCTA TGCCGATATG TCGGCCGCTT ATAACTGGCT GTTCGGCACC
TGGCTTCCGC AATCCGACCG CGAAGCTGAC GACCGCCCGG TCGTCGAGAA GTATCTCAAC
AGCCCGCAGG ACACCAAGCC CTCGGACCTC CTCACAGACC TCTGCCTGCC GCTGCGCTCG
ATCGCTCCAT CTCCAGATTG A
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| Protein sequence | MTRTNYQDRL DRVTSYIHDN LDGELDFDRI AEVASLSPYH WHRIYHACRG ETAVATTRRL
RLQRASVSLA QTDDPIAQIA TKAGYASPAA FTRAFADAYG LPPATYRERG SHADFRPGQL
ATQQGGWSIE IQRFDAIPAF AIRHDGPYIE IGKAFGMLFG QLAARGALPE RIEMIAVYLD
DPTAVPLERL RSFAALAAPG GKDLDPPVER IEIAGGDYAV LRHKGPYADM SAAYNWLFGT
WLPQSDREAD DRPVVEKYLN SPQDTKPSDL LTDLCLPLRS IAPSPD
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