| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0928 |
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| Symbol | |
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| ID | 6408582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 988240 |
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| End bp | 989157 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710842 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_001989961 |
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| Protein GI | 192289356 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.664518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCGTG TCGTCCTGAT TCTTGCCGCG AGCCTGTTCG CTTTGCTGCC GGCGCACGCG
CAGCAGCGCG TCCGGGTGGT CGCGAGCTTC TCGATTCTCG GTGATTTCGT CCGCAATGTC
GGTGGCGACC GCGTCGACAT TGCCACGCTG GTCGGCCCCG GCGGCGACGT TCACGTCTAT
ACGCCGTCCC CGACCGACGC CAAGAAAGTC GCCGACGCCA AGCTGCTGGT CGTCAACGGC
CTCGGCCTCG AAGGCTGGCT GCCGCGGTTG GTGCAGTCCT CCGGCAGCAA AGCCACGGTC
GTCATCGCCA CCAAGGGCAT CACGCCGCGC GATGCGGACG GGGACGACGC CCACGCCGGC
GGTGGTCACG CCCACGATCA TGGCGATGGC CACGCCGATC CACATGCCTG GCAGTCGGTT
ACCAACGCCA AAACCTATGT GGGCAATATC CGTGACGCGC TGATCGCCGC CGATCCGGCC
GGCGAGGCCG CGTACCGCAC CAACGCCACG GCATATCTGG CCAAGCTCGA CGCGCTCGAC
CGCGAAGTCC GCGACCTGGC TGCCAAGATC CCCGAGACCA AGCGCAAGGT GATCTCGACC
CACGACGCCT TCGGCTATTT CGCCGCTGCC TACCGGATCG TCTTCATCGC GCCGCAGGGC
GTCTCGACCG AATCCGAAGC CAGCGCCCGC GACGTTGCCA AGATCATCAC CCAGATCCGT
AAGGACAAGG TGCCGGCGGT GTTCCTGGAG AACGTCACCG ACCCGCGCCT GATGCAGCGG
ATCAGCGCCG AGACCGGCGC CAAGATCGGT GGCACGCTGT ATTCCGACAG CCTCACGCCT
GAAAACGGCG ACGCCCCCAC TTACATTGAT ATGGTCCGGC ACAATATAAG AACGCTGACC
GGCGCGCTGA GCGGATGA
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| Protein sequence | MFRVVLILAA SLFALLPAHA QQRVRVVASF SILGDFVRNV GGDRVDIATL VGPGGDVHVY
TPSPTDAKKV ADAKLLVVNG LGLEGWLPRL VQSSGSKATV VIATKGITPR DADGDDAHAG
GGHAHDHGDG HADPHAWQSV TNAKTYVGNI RDALIAADPA GEAAYRTNAT AYLAKLDALD
REVRDLAAKI PETKRKVIST HDAFGYFAAA YRIVFIAPQG VSTESEASAR DVAKIITQIR
KDKVPAVFLE NVTDPRLMQR ISAETGAKIG GTLYSDSLTP ENGDAPTYID MVRHNIRTLT
GALSG
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