Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0920 |
Symbol | |
ID | 6408574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 975737 |
End bp | 976414 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710834 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001989953 |
Protein GI | 192289348 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.491034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCC CCGCCAGCAC GCACTTGATC ATTGCCGACG ACCACCCGTT GTTTCGCGAT GCGCTCCGCC TGGCGGTTGC CGGCGTGGTC TCCTCCGCGA AGATCGGTGA GGTCGGTTCC TTCGAAGACC TGACTGCAAT GCTCGAGCGC GAGGGCGACG TCGACCTGGT GCTGCTCGAC CTCAAGATGC CTGGGATCAG CGGTTTTTCC GGGCTGATCT ATCTCCGGGC TCAGTATCCG GCGATCCCGG TGGTCGTCGT GTCGGCCAGC GACGACGTCG AAACCATCCG CCGCTCGCTC GATTTCGGCG CCTCCGGCTT CGTGCCGAAG CGGTTCGGCG TCGAAAAGCT CGGCGAAGCG ATTCTGCGGG TGCTGGACGG CGACGTCTGG GTTCCGCCGG ATGTCGATCT GTCGGCTGCG GCCGATCCCG AGACCTCCAA GCTGCGCGAT CGGCTGGTGA CGCTGACCCC GCAGCAGGTG CGGGTGCTGA TGATGCTGTC CGAAGGCCTG CTCAACAAGC AGATCGCCTA CGAGCTCGGG GTGTCGGAAG CGACCATCAA GGCTCACGTC TCGGCGATCC TGCAGAAGCT CGGCGTCGAA AGCCGCACCC AGGCGGTGAT CGCCGCGGCC AAGATTTCCG GCAGCCAGTG GCGCCAGGAA GAGCCGATCG CGTCGTAA
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Protein sequence | MSTPASTHLI IADDHPLFRD ALRLAVAGVV SSAKIGEVGS FEDLTAMLER EGDVDLVLLD LKMPGISGFS GLIYLRAQYP AIPVVVVSAS DDVETIRRSL DFGASGFVPK RFGVEKLGEA ILRVLDGDVW VPPDVDLSAA ADPETSKLRD RLVTLTPQQV RVLMMLSEGL LNKQIAYELG VSEATIKAHV SAILQKLGVE SRTQAVIAAA KISGSQWRQE EPIAS
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