Gene Rpal_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0920 
Symbol 
ID6408574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp975737 
End bp976414 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID642710834 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001989953 
Protein GI192289348 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.491034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC CCGCCAGCAC GCACTTGATC ATTGCCGACG ACCACCCGTT GTTTCGCGAT 
GCGCTCCGCC TGGCGGTTGC CGGCGTGGTC TCCTCCGCGA AGATCGGTGA GGTCGGTTCC
TTCGAAGACC TGACTGCAAT GCTCGAGCGC GAGGGCGACG TCGACCTGGT GCTGCTCGAC
CTCAAGATGC CTGGGATCAG CGGTTTTTCC GGGCTGATCT ATCTCCGGGC TCAGTATCCG
GCGATCCCGG TGGTCGTCGT GTCGGCCAGC GACGACGTCG AAACCATCCG CCGCTCGCTC
GATTTCGGCG CCTCCGGCTT CGTGCCGAAG CGGTTCGGCG TCGAAAAGCT CGGCGAAGCG
ATTCTGCGGG TGCTGGACGG CGACGTCTGG GTTCCGCCGG ATGTCGATCT GTCGGCTGCG
GCCGATCCCG AGACCTCCAA GCTGCGCGAT CGGCTGGTGA CGCTGACCCC GCAGCAGGTG
CGGGTGCTGA TGATGCTGTC CGAAGGCCTG CTCAACAAGC AGATCGCCTA CGAGCTCGGG
GTGTCGGAAG CGACCATCAA GGCTCACGTC TCGGCGATCC TGCAGAAGCT CGGCGTCGAA
AGCCGCACCC AGGCGGTGAT CGCCGCGGCC AAGATTTCCG GCAGCCAGTG GCGCCAGGAA
GAGCCGATCG CGTCGTAA
 
Protein sequence
MSTPASTHLI IADDHPLFRD ALRLAVAGVV SSAKIGEVGS FEDLTAMLER EGDVDLVLLD 
LKMPGISGFS GLIYLRAQYP AIPVVVVSAS DDVETIRRSL DFGASGFVPK RFGVEKLGEA
ILRVLDGDVW VPPDVDLSAA ADPETSKLRD RLVTLTPQQV RVLMMLSEGL LNKQIAYELG
VSEATIKAHV SAILQKLGVE SRTQAVIAAA KISGSQWRQE EPIAS