Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0908 |
Symbol | |
ID | 6408562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 966075 |
End bp | 967364 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710822 |
Product | peptidase M16 domain protein |
Protein accession | YP_001989941 |
Protein GI | 192289336 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCG AAGTCAGCAA GCTTCCCTCC GGCCTCACCA TCGTCACCGA CACCATGCCG CATCTCGAGA CTGCAGCGCT CGGCGTCTGG ACCGGCGTCG GCGGCCGCGA CGAAAAGCCG GACGAGCACG GCATCTCGCA TCTCCTCGAA CACATGGCGT TCAAGGGCAC CACGCGCCGC ACCTCGCGCG AGATCGCCGA GGAGATCGAG GCGGTCGGCG GCGACCTCAA TGCCGGCACT TCGACCGAGA CCACCGCGTA TTACGCGCGG GTGATGAAGG CAGACGTGCC GCTGGCGCTC GATGTCTTGT CCGACATTCT CGCCAATCCG TCATTCGAAG CCGAAGAGCT CGAACGCGAG AAGAGCGTGA TCGTGCAGGA GATCGGCGCC GCGCAGGACA CGCCCGACGA CGTCGTGTTC GAATACCTGA ACGAGCTATG CTACCCGGAG CAGCCGATCG GCCGTTCGTT GCTCGGCACC GCCAAGACGC TGAAGAGCTT CAGCCGGGAA AAGCTGCAGT CGTATCTGTC GACGCATTAT CGCGGTCCCG ACATGGTGGT GGCGGCGGCC GGCGCGGTCG ATCACGCCCG CATCGTCGAA GAGGTTTCCC ACCGCTTCGC CAGCTTCGAC GGCACGCCGG CACCGAAGCC GCAGCCGGCG ATGTTCGGCG CGGGCGGCTC CCGCGTCGTG CACCGCGACC TCGAGCAGGC GCATCTGACC CTGGCGCTCG AAGGGCTGCC GCAGAGCGCG CCGACGCTGT TCAGCCTGCA GGTGTTCACC AACATCCTCG GCGGCGGAAT GTCGTCGCGG CTGTTCCAGG AGGTGCGGGA GAAGCGCGGG CTGTGCTACT CGATCTACAC CTTCCATGCG CCCTACAGCG ACACCGGGTT CTTCGGTCTC TATACCGGCA CCGATCCGGC CGATGCGCCG GAGATGATGG AAGTGATCGT CGATGTCATC AACGATGCGG TCGACACCCT GACCGACGCC GAGATCTCTC GGGCCAAGGC CCAGATGAAG GCAGGCCTGC TGATGGCGCT GGAAAGCTGT TCGTCGCGTG CCGAGCAGCT CGCGCGGCAC ATCCTGGCCT ACGGCCGGCC GTTGCCGGTC GACGAGCTGG TCGGACGAAT CGATGCCGTC ACCATCGATA CCGCGCGGGA AGCAGGGCGC ACGCTGCTGG CGCGCAGCCG GCCGGCCGTG GTGGCGCTCG GCAGCGGCCG CGGTCTCGAC AGAGCTGTCA GCTTTGCTGA AGGCTTGACA CAATCCAAGG CCAAGACGTC CTATCATTGA
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Protein sequence | MTVEVSKLPS GLTIVTDTMP HLETAALGVW TGVGGRDEKP DEHGISHLLE HMAFKGTTRR TSREIAEEIE AVGGDLNAGT STETTAYYAR VMKADVPLAL DVLSDILANP SFEAEELERE KSVIVQEIGA AQDTPDDVVF EYLNELCYPE QPIGRSLLGT AKTLKSFSRE KLQSYLSTHY RGPDMVVAAA GAVDHARIVE EVSHRFASFD GTPAPKPQPA MFGAGGSRVV HRDLEQAHLT LALEGLPQSA PTLFSLQVFT NILGGGMSSR LFQEVREKRG LCYSIYTFHA PYSDTGFFGL YTGTDPADAP EMMEVIVDVI NDAVDTLTDA EISRAKAQMK AGLLMALESC SSRAEQLARH ILAYGRPLPV DELVGRIDAV TIDTAREAGR TLLARSRPAV VALGSGRGLD RAVSFAEGLT QSKAKTSYH
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