| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0900 |
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| Symbol | |
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| ID | 6408554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 958773 |
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| End bp | 960398 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642710814 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001989933 |
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| Protein GI | 192289328 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0552276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGG AAGCTGCAAG GGTCGCCCAT TCCGAACACG CGCACGACGA TCACGCGCAT
GCGCATCCGA CCGGATGGCG ACGCTATCTG TACTCGACCA ACCACAAGGA CATCGGCACC
ATGTATCTGG TGTTCGCCGT GATGGCGGGC GTCATCGGTG CGGCGATGTC GATCGCGATC
CGGGTCGAGT TGATGTTCCC CGGCATTCAG ATCTTTCACA ACACCCACAC CTACAACGTC
TTCGTCACCT CGCACGGCCT GATCATGATC TTCTTCATGG TGATGCCGGC GATGATCGGC
GGGTTCGGCA ACTGGTTCGT GCCGCTGATG ATCGGCGCGC CGGACATGGC GTTCCCGCGG
ATGAACAACA TCTCGTTCTG GCTGCTGCCG GCCGCGTTCG CGCTGCTGAT CATCTCCACC
TTCGTGGAGG GCGAGCCGTC GTCGAACGGC GTCGGCGCCG GCTGGACGAT GTATGCGCCG
CTATCGACCA TCGGGCATCC CGGACCCGCC GTGGACTTCG CGATCTTGGC GCTACATTTG
GCCGGTGCAT CGTCGATCCT CGGCGCGATC AACTTCATCA CCACCATCTT CAACATGCGG
GCGCCGGGCA TGACCCTGCA CAAGATGCCG CTGTTCGTGT GGTCGGTGCT GATCACCGCG
TTCCTGCTGC TTCTGTCGCT GCCGGTGCTT GCTGGTGCCA TCACCATGCT GCTGACCGAC
CGCAACTTCG GCACCACCTT CTTCTCGGCC GAAGGCGGCG GCGATCCGCT GCTGTTCCAG
CACCTGTTCT GGTTCTTCGG TCATCCCGAA GTCTACATCC TGATCCTGCC GGGTTTCGGC
ATGATCAGCC AGATCGTGTC GACCTTCTCC AAGAAGCCGG TGTTCGGCTA TCTCGGTATG
GCCTACGCGA TGGTGGCGAT CGGCGTGATC GGCTTCGTGG TGTGGGCGCA CCACATGTAC
ACCGTCGGCA TGTCGAGCAC GACGCAGGCA TATTTCGTCG CCGCCACCAT GGTGATCGCG
GTGCCGACCG GCGTGAAGGT GTTCTCCTGG ATCGCCACGA TGTGGGGCGG CTCGATCGAA
TTCAAGACGC CGATGCTGTG GGCGGTGGGG TTCATCTTCC TGTTCACCGT CGGCGGCGTC
ACCGGCGTGG TGCTGGCCAA TGCCGGCGTC GACCGGGTGC TGCAGGACAC CTACTACGTC
GTCGCGCACT TCCATTACGT GCTGTCGCTC GGCGCCGTCT TCGCGATTTT CGCGGGCTGG
TACTACTGGT TCCCGAAGAT GACCGGCTAC ATGTACAACG AGACCATCGG CAAGCTGCAC
TTCTGGCTCA CCTTTATCGG CGTCAACATG GTGTTCTTCC CGCAGCACTT CCTCGGTCTG
TCGGGGATGC CGCGGCGCTA CGTCGATTAC CCGGATGCGT TCGCCGGCTG GAATCTGGTG
TCTTCGATCG GCTCCTATAT CTCCGGCTTC GCCGTGCTGG TCTTCCTGTA CGGAATGACG
CTCGCCTTCA TCCGCAAGGA GCGCGCGGCG GACAATCCGT GGGGCGCCGG CGCCACCACG
CTGGAGTGGA CGCTGTCGTC GCCGCCGCCT TTCCATCAGT TCGAGGTGCT GCCGCAGGTG
CGCTGA
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| Protein sequence | MAMEAARVAH SEHAHDDHAH AHPTGWRRYL YSTNHKDIGT MYLVFAVMAG VIGAAMSIAI
RVELMFPGIQ IFHNTHTYNV FVTSHGLIMI FFMVMPAMIG GFGNWFVPLM IGAPDMAFPR
MNNISFWLLP AAFALLIIST FVEGEPSSNG VGAGWTMYAP LSTIGHPGPA VDFAILALHL
AGASSILGAI NFITTIFNMR APGMTLHKMP LFVWSVLITA FLLLLSLPVL AGAITMLLTD
RNFGTTFFSA EGGGDPLLFQ HLFWFFGHPE VYILILPGFG MISQIVSTFS KKPVFGYLGM
AYAMVAIGVI GFVVWAHHMY TVGMSSTTQA YFVAATMVIA VPTGVKVFSW IATMWGGSIE
FKTPMLWAVG FIFLFTVGGV TGVVLANAGV DRVLQDTYYV VAHFHYVLSL GAVFAIFAGW
YYWFPKMTGY MYNETIGKLH FWLTFIGVNM VFFPQHFLGL SGMPRRYVDY PDAFAGWNLV
SSIGSYISGF AVLVFLYGMT LAFIRKERAA DNPWGAGATT LEWTLSSPPP FHQFEVLPQV
R
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