Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0888 |
Symbol | |
ID | 6408542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 949277 |
End bp | 949891 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710802 |
Product | Glutathione S-transferase domain |
Protein accession | YP_001989921 |
Protein GI | 192289316 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGT ATTATTCACC CGGTGCATGT TCGCTGTCGC CGCATATCGC GCTCAGCGAG GCCGGCCTGC CGTTCGACCT GGTCAAGGTC GACATCCGGG CGAAGAAGCT GGAGAACGGC GACGACTACG CCGCGATCAA TCCGAAGGGG TCGGTGCCTG CGCTCGGCCT CGACGACGGC TCGGTGCTGA CCGAGGGACC GGCGATCGTG CAGTTCATCG CCGACAAGGA AGGCTCCGGC AAGCTGGCGC CGGCCAACGG ATCGCCGGAG CGCTACCGGC TGCAGGAATG GCTGAACTAT ATCTCGACCG ACCTGCACAA GAGCTTCGGC CCGCTGTTCG CCCCGACGCT CGGCGACGAT GCCAAGAATT TCTTCAAGGA CCGCATCGCT CGCCACCTCG GCTATGTCGA CAAGCAGCTC GCCGGCAAAG ACTATCTGAT GGGCTCGTCG TTCACGGTGG CCGACGGCTA TCTGTTCGTG ATCCTGAGCT GGTGCGACCG GATGAAGATC GACCTCGCCC CCTACCCCAA CCTCGCCGCC TTCAAGGCCC GCGTCGCCGC TCGGCCGAAG GTGCAGGAAG CGATGCAAAG CGAAGGGCTG CTGCAGAAGG CGTAA
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Protein sequence | MKLYYSPGAC SLSPHIALSE AGLPFDLVKV DIRAKKLENG DDYAAINPKG SVPALGLDDG SVLTEGPAIV QFIADKEGSG KLAPANGSPE RYRLQEWLNY ISTDLHKSFG PLFAPTLGDD AKNFFKDRIA RHLGYVDKQL AGKDYLMGSS FTVADGYLFV ILSWCDRMKI DLAPYPNLAA FKARVAARPK VQEAMQSEGL LQKA
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