| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0852 |
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| Symbol | |
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| ID | 6408506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 902578 |
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| End bp | 903420 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710766 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001989885 |
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| Protein GI | 192289280 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGGC TCGACGGTAA GGTTGCGGTG ATCACCGGTG CGACCAGCGG CATCGGTTGG
CGCACCGCGG AGGTATTCGT TGCCGAAGGC GCCCGGATCG TCGTCGCCGG CCGCCGCGTG
GCCGAGGGCG AGGCGCTGGC GGCGCAGCTC GGCTCGTCCT GCGTGTTCAA GCAGACCGAC
GTCACCGACG AGGCTCAGGT GAAGGCCTTG ATCGACACCG CGCTCGACAC GTTCGGCCGG
CTCGACTGCC TGTTCAACAA TGCCGGCGGT CCGGCGCAGA CCGGCGGCAT CGAAGGCCTC
GAGGTCGATC GCTTCGACAC CGCGATGGCG ACGCTGGTGC GCAGCGTGAT GCTGGGCATG
AAGCACGCCG CGCCGGCGAT GAAGAAGCAG GGCGCCGGAT CGATTATCAA CAACGGCAGC
ATCGCCGGCC GACTCGCCGG GTTTTCGTCG TCGCTGGTGT ACGGCGCTGC CAAGGCGGCA
GTGAATCATT TGACCAAATG CGTCGCCATG GAGCTCGGCG AATCCGGCAT CCGCGTCAAT
TCGATCTCGC CCGGCGCGAT CGCGACCGGC ATCTTCGGCA AGGCGCTGGG GCTCACCACC
GATGCGGCCG AAAAGACCGC AGCGACGATG CGCGAGATTT ACAAGACCGC GCAGCCGATT
CCCCGCGCCG GCATTCCGGA CGATATCGCC CAGGCCGCGG TGTTTCTCGC CAGTGACGAG
TCGACCTTCA TCAACGGTCA TGATCTCGTC GTCGACGGCG GCATCACCGG CGGCCGCAAC
TGGAAGGCCC AGCAACAAGG CTACGTCGCG CTGCGAAAGG CGTTCGATCA CGGCGAGGGG
TGA
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| Protein sequence | MARLDGKVAV ITGATSGIGW RTAEVFVAEG ARIVVAGRRV AEGEALAAQL GSSCVFKQTD
VTDEAQVKAL IDTALDTFGR LDCLFNNAGG PAQTGGIEGL EVDRFDTAMA TLVRSVMLGM
KHAAPAMKKQ GAGSIINNGS IAGRLAGFSS SLVYGAAKAA VNHLTKCVAM ELGESGIRVN
SISPGAIATG IFGKALGLTT DAAEKTAATM REIYKTAQPI PRAGIPDDIA QAAVFLASDE
STFINGHDLV VDGGITGGRN WKAQQQGYVA LRKAFDHGEG
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