| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0848 |
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| Symbol | |
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| ID | 6408502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 898261 |
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| End bp | 899526 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710762 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001989881 |
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| Protein GI | 192289276 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCG ACCACAGCGA CAAGGTGCAA CGGCTGCGCG CGCAGCTGTC CGACTTCATG
CGTTTCCACG TCGCGCCGGC CAATGTCGCC TGGCATCGCG AGGTGGCCGC GGGGCACTAT
CCGCTGGCTC TGATCGAGCG GCTGAAGTCG CGGGCGTTTT CCGAAGATCT CTGGAATCTG
TTTCTGCCGG GCCTGCGGGA TGAGGATCCA GGCCAGCGTC TTAGCAACGT CGAATATGCG
CCGCTCGCCG AGATCATGGG CCGGGTGCAT TGGGCGTCAG AAGTATTCAA CTGCAACGCG
CCCGACACCG GCAACATGGA GTTGCTGCAT CTGGCAGCGA CGCCAGAGCA GCGCGCCGAG
TGGCTCGATC CGCTGCTGAT CGGCGAAATC CGCTCCTGCT TCGCGATGAG CGAGCCGGAT
GCCGCCTCGT CGGACGCGCG CAATATCCGC ACCACCATCA CCCGTGACGG CGACGACTAC
GTCATCAACG GCCGCAAATG GTTCATCACC GGGGCGGCGC ATCCGAACTG CAAATTGGCG
ATCGTGATGG GCGTCACCGG CGAACACCTG CCGGCAACTT CGACCGAGCG GCACTCGATG
CTGCTGGTGC CGATGAACAC GCCGGGGCTT TCGATCGTCC GCAACATCCC GGTGATGCAC
TATCACTCGC CGGAAGGGCA TTGTGAGCTG GTGTTCCGCA ACGTCCGGGT ACCGGCCGCC
AATCTGCTCG GCGAGGAAGG TAAAGGCTTT CGACTGGCGC AGGATCGGCT CGGTCCCGGC
CGGGTACATC ATTGCATGCG GACCATCGGC CAATGCGAGG TCGCGCTCGA ACTGATGGCG
GAGCGTGCGC TCGAACGCGT GGCGTTCGGC AAGCACCTTG CCGACTTCGC GAATATTCAA
GACTGGATCG CCGAATCGCG GCTGGAGATC GATCAGGCGC GGCTGCTGGT GATGCAGGCG
GCGCACCGCA TGGATCGCGC CGGCAACGCC GCGGCGCGGG TCGATGTCTC GGCGATCAAG
CTAGTGGCGG CGCGGCTGCA AACGAGGATC GTCGATCGCG CCATGCAGGT GTTCGGGGCG
ATGGGCCTGA CGCCGGATAC GCCATTGTCT TACTTATGGA CCTGGGGCCG CGCGATGCGG
TTTCTCGACG GGCCTGATGA GGTGCATCTG CGCGTGGTGG CCCGAGCCGA ACTGGCGAAG
GCGAAAGCCC AGGCGGGCCA AAACGCCCAC CACTTCGTTC CACCGTCGCA ATTGCTGTCG
GAGTGA
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| Protein sequence | MDFDHSDKVQ RLRAQLSDFM RFHVAPANVA WHREVAAGHY PLALIERLKS RAFSEDLWNL
FLPGLRDEDP GQRLSNVEYA PLAEIMGRVH WASEVFNCNA PDTGNMELLH LAATPEQRAE
WLDPLLIGEI RSCFAMSEPD AASSDARNIR TTITRDGDDY VINGRKWFIT GAAHPNCKLA
IVMGVTGEHL PATSTERHSM LLVPMNTPGL SIVRNIPVMH YHSPEGHCEL VFRNVRVPAA
NLLGEEGKGF RLAQDRLGPG RVHHCMRTIG QCEVALELMA ERALERVAFG KHLADFANIQ
DWIAESRLEI DQARLLVMQA AHRMDRAGNA AARVDVSAIK LVAARLQTRI VDRAMQVFGA
MGLTPDTPLS YLWTWGRAMR FLDGPDEVHL RVVARAELAK AKAQAGQNAH HFVPPSQLLS
E
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