Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0745 |
Symbol | |
ID | 6408398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 784122 |
End bp | 787106 |
Gene Length | 2985 bp |
Protein Length | 994 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710660 |
Product | putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein |
Protein accession | YP_001989780 |
Protein GI | 192289175 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.375637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGTA TTGTGCGACG CGAGCAGTTC TCGGACGCGA CCTTTCTGTG GGACGTCGAG GCGCCGGATA TCGCGGCTTC AGCCGAGCCC GGCCATTTCG TGATGTTGCG TCTCTACGAC GGTGCCGAGC GCATTCCGCT CACCGTTGCC GATTTCGATC GCGACAAGGG ACTGGTGACT GTCGTCGTCC AGGCGCTCGG CAAGACCACG CGAGAGATGC GCGACAAGTT CAAGGAAGGC GAGGCGTTCG AGGATTTCGT CGGGCCGCTC GGTCTGCCGC AACACATCGA CAAGGTCGAT CACGTGGTGT TCGTCGGCGG CGGCCTCGGC GTCGCGCCGA TCTTCCCGCA GCTTCGCGCC TTCAAGCAAT CCGGCGCGCG CACCACCGCG ATCATGGGTT TCCGCACCAA GGATCTGGTG TTTTGGGAAG ACAAGTTCCG CGAGTTCGCC GACGAGCTGA TCATCTGCAC CGATGACGGC AGCTACGGCG AGCCCGGCCT CGTCACGGCA GCGCTGGAGC GGGTGATCAC CCAGCAGAAG CCTGACAAGG TGGTGGCGAT CGGCCCGATG CCGATGATGC ACGCTTGCGT CGAGACGACC CGTCCGCACG GCGTCAAGAC CATGGTGTCG CTCAACACCA TCATGGTCGA CGGCACCGGC ATGTGCGGTT CGTGCCGCGT CACGGTCGGT GGCGAAGTGA AATTCGCCTG TGTCGACGGC CCGGATTTCG ACGGCCACAA AGTCGACTTC CACGAGCTGC ATGCGCGCCA GAAGCGGTTC AAGACCGAGG AAGACAAGGC AAACGAACAC TTCGCCCATG TCTGCAATCT CGAAAAACAG CTGATTGTCG AGGGCAAGCG CAACTACAAG AAGCTGGCGA CGCTGCCGCC GCATCAGACC CCGATGCCGG AGCGCGACGC CCACGAGCGC GCCACCAACT TCAAGGAAGT CAATCTCGGC TATTCAGTCG AGGAAGCCCT GCAGGAGGCG GAGCGCTGCA TTCAGTGCAT CACACCGACC TGCGTCGCCG GCTGCCCGGT CGGGATCGAC ATTCCGGTGT TCATCCGCAA CATTCTGTTC CGCGACTTCG ATGCGGCGCT GGAGACGATC TATCAGTCGA GCATCTTCCC GTCGATCTGC GGTCGGGTCT GCCCGCAGGA GACGCAGTGC GAAGCGCAGT GCATCATCCG CAAATACAAG AAGCATGAGC CGGTCGCGAT CGGCCGGCTT GAGCGCTTCA TCGGCGACAA TGCGCGGGCG CCGAAGAGCA AGCCGATCGA TCTCAGCAAA GCCATCGGCA AGGTCGCGAT CGTCGGCTCC GGTCCGGCTG GCCTCGCCGC CGCCGCCGAT CTCACCCGCT ACAATGTCGA GACCACGGTG TACGAGGCGC TGCACGTGCT CGGCGGCGTG CTGCAATACG GCATCCCGTC GTTCCGGCTG CCGCGCGACA TCATCGATCG CGAAATCCAG CGGCTGAAGG ACATCGGCGT CAAGTTCGAG ACCAACAAGG TCGTCGGCAA GACCTTCACC ATCGAACAGT TGATGAATGG ACGCGGCTTC GACGCGGTGT TCGTGGCGGC GGGCGCCGGT GCGCCGACCT TCCTGGGTAT TCCCGGTGAG TTTGCTGGCC GGGTTTATTC GGCCAACGAG TTCCTCACTC GGATCAACCT GATGGGCGGC GACCGCTTCC CGTATCTCGA TACGCCGGTT AGCGTCGGCA ACAGCGTCAT CGTGATCGGT GCCGGCAACA CCGCGATGGA CTGCCTGCGC GTCGCCCGCC GCGTCGGCGC CGCAACGGTG CGCTGCGTGT ATCGCCGCTC CGAGGCTGAA GCGCCGGCCC GCATCGAGGA AATTCGCCAC GCCAAGGAGG AGGGAGTCGA TTTCTTCTTC CTGCACTCGC CGGTGGAGAT TCTCGTCACC GAAAGCGGCG ACGTTCGTGC GGTGCGGCTG CAGAAAATGG AGCTCGGCGA GGCCGACGAG CGCGGCCGCC GCAAGCCGGT GCCGCTCGAC GAGTTTATCG AGCTCGAATG CGACACCGTG ATCTACGCGC TCGGCACCAA GCCCAATCCG ATCATCGGCC AGGCGACGCC CGGCCTCGCG CTTAACAAGT GGGGCAACAT CGCAGCCGAT GACGACACCC AGTCGACCAA CATGCCGGGC GTATTCGCCG GCGGGGACAT CGTCACCGGC GGCGCGACCG TGATCCTGGC GATGAGCGCG GGGCGCCGCG CCGCCAAGTC GATCGCGGCC TGGCTGCGGC TGAACAAGAC CAAATGGCCC ATCACGGTGC AGGATGCCGA CGACTTCGTC GCCGGCAAGC TGGCGCCTGC GATCGAGGAG GATGGCTTGG CGCATTGCCC GAAGTGTCAC CAGCCGCTGG AAGGCTCCGA AGAGTACATC TGCTGCGCTG GTTCGGAGCT GCAGTGGCGC TGCGACGACT GCGCCAAGGT CAGCGAAGGC TTCGCGTTCC CCTATGGCAT GTGCCCGCAC TGCGGCGGCA AGCTGCAGCC GCTCGATCGC GCCGGCGTTA GCGATGAGGC GGGACTTGGG GCGATCCGCA CCGCTTTCGA GATCGAGCTC GGTGGCCGCG CGTTCTATGC CCGCGCCGCA AAGGAAACGT CCGATCCGAC ATTGCAGGAG CTGTTCCTCA GCTTCGCCGC GATGGAAGAG GAGCACATGA CCACGCTGGC CAATCGCTAC CATGTGGCGA TTCCGCAGGC GACCGAGGGC TTCCATCTCG GCACCGCGGC GATCATGGCC GGCGTCAAAG GCCGGATCGG CGATCCGACC ACGCTGTTCG AAGCCGCGAT CGAGTTCGAA CGGCGCGCCG CCTCGTTCTT CAAGGCCCGC GTGGGCGAGA CGCCGGACGG TTCGGTCGAG CGCCAGCTGT ATCGCGAGCT CGCCGCCGAA GAGGACGAGC ATGTTTCGGT GCTGCAGACC GAATTCGCGC GCTGGAAGGA AGGCAAGCGC GGGCTGCTGA CGTAA
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Protein sequence | MYRIVRREQF SDATFLWDVE APDIAASAEP GHFVMLRLYD GAERIPLTVA DFDRDKGLVT VVVQALGKTT REMRDKFKEG EAFEDFVGPL GLPQHIDKVD HVVFVGGGLG VAPIFPQLRA FKQSGARTTA IMGFRTKDLV FWEDKFREFA DELIICTDDG SYGEPGLVTA ALERVITQQK PDKVVAIGPM PMMHACVETT RPHGVKTMVS LNTIMVDGTG MCGSCRVTVG GEVKFACVDG PDFDGHKVDF HELHARQKRF KTEEDKANEH FAHVCNLEKQ LIVEGKRNYK KLATLPPHQT PMPERDAHER ATNFKEVNLG YSVEEALQEA ERCIQCITPT CVAGCPVGID IPVFIRNILF RDFDAALETI YQSSIFPSIC GRVCPQETQC EAQCIIRKYK KHEPVAIGRL ERFIGDNARA PKSKPIDLSK AIGKVAIVGS GPAGLAAAAD LTRYNVETTV YEALHVLGGV LQYGIPSFRL PRDIIDREIQ RLKDIGVKFE TNKVVGKTFT IEQLMNGRGF DAVFVAAGAG APTFLGIPGE FAGRVYSANE FLTRINLMGG DRFPYLDTPV SVGNSVIVIG AGNTAMDCLR VARRVGAATV RCVYRRSEAE APARIEEIRH AKEEGVDFFF LHSPVEILVT ESGDVRAVRL QKMELGEADE RGRRKPVPLD EFIELECDTV IYALGTKPNP IIGQATPGLA LNKWGNIAAD DDTQSTNMPG VFAGGDIVTG GATVILAMSA GRRAAKSIAA WLRLNKTKWP ITVQDADDFV AGKLAPAIEE DGLAHCPKCH QPLEGSEEYI CCAGSELQWR CDDCAKVSEG FAFPYGMCPH CGGKLQPLDR AGVSDEAGLG AIRTAFEIEL GGRAFYARAA KETSDPTLQE LFLSFAAMEE EHMTTLANRY HVAIPQATEG FHLGTAAIMA GVKGRIGDPT TLFEAAIEFE RRAASFFKAR VGETPDGSVE RQLYRELAAE EDEHVSVLQT EFARWKEGKR GLLT
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