Gene Rpal_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0615 
Symbol 
ID6408265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp669963 
End bp670364 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content70% 
IMG OID642710528 
Productprotein of unknown function DUF985 
Protein accessionYP_001989650 
Protein GI192289045 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.199543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGCTCG GTCTGCAGCC GCACCCGGAG GGCGGACACT ATCGCGAAAC GTTTCGCGAT 
CCCCGCTGCG ACGCCAGCGG ACGCAGCTAC TCGACCGCGA TCCACTTTCT GCTGCGGGCG
GGCGAGCGCT CGCACTGGCA CCGGATCGAT GCGGTCGAAG TCTGGCACTA TTACGCAGGC
GCGGCCCTGA TGCTGGAAGT CGCCGGCGAA GACGGTCACC GCGCCGCGAC GCTCGGCCCA
GATCTCGTCG CCGGGCATCT GCCACAAGTG ATCGTGCCGC CGCAGGCCTG GCAGGCGGCA
ACATCGACCG GCGAGTGGAC GCTGGTCGGC TGCACTGTCG CGCCGGGCTT CGATTTCGCC
GGCTTCGAAC TGGCGCCGCC CGGCTGGGAG CCGGCGCGAT GA
 
Protein sequence
MRLGLQPHPE GGHYRETFRD PRCDASGRSY STAIHFLLRA GERSHWHRID AVEVWHYYAG 
AALMLEVAGE DGHRAATLGP DLVAGHLPQV IVPPQAWQAA TSTGEWTLVG CTVAPGFDFA
GFELAPPGWE PAR